Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) higBA (relBE)/COG4683-HTH_37
Location 357062..357708 Replicon chromosome
Accession NZ_CP071027
Organism Klebsiella pneumoniae strain KP-1Pi

Toxin (Protein)


Gene name higB Uniprot ID A0A4S7KZ03
Locus tag HZC88_RS01630 Protein ID WP_032433636.1
Coordinates 357062..357409 (+) Length 116 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID A0A4S7L580
Locus tag HZC88_RS01635 Protein ID WP_019725405.1
Coordinates 357409..357708 (+) Length 100 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HZC88_RS01620 (352988) 352988..354421 + 1434 WP_032433640.1 glycogen synthase GlgA -
HZC88_RS01625 (354439) 354439..356886 + 2448 WP_032433638.1 glycogen phosphorylase -
HZC88_RS01630 (357062) 357062..357409 + 348 WP_032433636.1 type II toxin-antitoxin system RelE/ParE family toxin Toxin
HZC88_RS01635 (357409) 357409..357708 + 300 WP_019725405.1 XRE family transcriptional regulator Antitoxin
HZC88_RS01640 (357771) 357771..359279 - 1509 WP_029602548.1 glycerol-3-phosphate dehydrogenase -
HZC88_RS01645 (359484) 359484..359813 + 330 WP_002920552.1 thiosulfate sulfurtransferase GlpE -
HZC88_RS01650 (359864) 359864..360694 + 831 WP_004151408.1 rhomboid family intramembrane serine protease GlpG -
HZC88_RS01655 (360744) 360744..361502 + 759 WP_002920548.1 DeoR/GlpR family transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(13-107)

Antitoxin

Cro/C1-type helix-turn-helix domain

(31-84)


Sequences

Toxin        


Download         Length: 116 a.a.        Molecular weight: 13500.51 Da        Isoelectric Point: 6.2327

>T195115 WP_032433636.1 NZ_CP071027:357062-357409 [Klebsiella pneumoniae]
MWDVETTDTFDAWFELQSRALKEDMLATMLILSEFAPQLGRPYVDTVKDSTFQNMKELRVQHHGLPIRAFFAFDPLRKAI
VLCAGNKDGINEKRFYKEMITLADREFSQHLTKER

Download         Length: 348 bp

>T195115 NZ_CP094322:c1820229-1820128 [Edwardsiella anguillarum]
GCAAGGCATTCAATGCCTGCATAATGCCAACTTTTAGCGCACGGCTCTCCATAAGAGCCATTCCCCTAGACCTGACACAG
GAATCGTGCCAGGTCTTTTTTT

Antitoxin


Download         Length: 100 a.a.        Molecular weight: 10775.53 Da        Isoelectric Point: 9.7681

>AT195115 WP_019725405.1 NZ_CP071027:357409-357708 [Klebsiella pneumoniae]
MATLKELMAKQSPESQQRIAAKAAEIRQSVALNLLREELQMSQTEMAAAMGVKQPTIAKMEQTDNDPRLSTLKSYIAALG
GELSINVTLPTGKKVSFNL

Download         Length: 300 bp

>AT195115 NZ_CP094322:1820126-1820236 [Edwardsiella anguillarum]
ATAAAAAAAGACCTGGCACGATTCCTGTGTCAGGTCTAGGGGAATGGCTCTTATGGAGAGCCGTGCGCTAAAAGTTGGCA
TTATGCAGGCATTGAATGCCTTGCTCTTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A4S7KZ03

Antitoxin

Source ID Structure
AlphaFold DB A0A4S7L580

References