Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2258920..2259137 Replicon chromosome
Accession NZ_CP070976
Organism Bacillus halotolerans strain MBH1

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag JYG31_RS11475 Protein ID WP_014470124.1
Coordinates 2258961..2259137 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2258920..2259020 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JYG31_RS11455 2254933..2256801 - 1869 WP_213417640.1 hypothetical protein -
JYG31_RS11460 2257141..2258373 - 1233 WP_213417642.1 hypothetical protein -
JYG31_RS11465 2258455..2258646 - 192 WP_213417644.1 hypothetical protein -
JYG31_RS11470 2258691..2258942 - 252 WP_213417645.1 hypothetical protein -
- 2258920..2259020 + 101 - - Antitoxin
JYG31_RS11475 2258961..2259137 - 177 WP_014470124.1 hypothetical protein Toxin
- 2259078..2259178 + 101 NuclAT_0 - -
- 2259078..2259178 + 101 NuclAT_0 - -
- 2259078..2259178 + 101 NuclAT_0 - -
- 2259078..2259178 + 101 NuclAT_0 - -
JYG31_RS11480 2260150..2260344 + 195 WP_072692657.1 hypothetical protein -
JYG31_RS11485 2260384..2262900 + 2517 WP_213417646.1 hypothetical protein -
JYG31_RS11490 2263157..2263432 + 276 WP_053574266.1 HU family DNA-binding protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2183059..2319229 136170


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 59 a.a.        Molecular weight: 6856.40 Da        Isoelectric Point: 12.8849

>T194881 WP_014470124.1 NZ_CP070976:c2259137-2258961 [Bacillus halotolerans]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRTRKRLRSKRQRKRIRR

Download         Length: 177 bp

>T194881 NZ_CP094149:18157-18939 [Helicobacter pylori]
ATGGAAACTAAAGAAGAAGATAAAGATAAAAAGCTAGAAAAAATTATTGTATTGCTGTGCGAAGAGGGGGATTTGTCCAG
CCAAAAAGATCAAATCATCAAAGATCTCAAAGAAATCTATAAAGGAGAATACAAGCATAAATATTCAAAAATCACAACTA
TTATTTTAAATTCCACAAGGGATAAAGAGCAAGCCTTTATGATGCTCACACAAAATATAAAGACACTCAAAGAGATTCAA
GATAATAAAGAAGTTGAAAGCATTAAACCAAAACTAGAAAAGCTTTATGATCACATGAATTTAGAGTGTATCAGACTGCA
AGATTTTGATGAGAAAATGAGTAGAGTTAAAAATGTTTCTATAAAGTTAGAAGATGAACTAAATAAAAACTATAAAAAAT
TAAGCGAAGAATTGAATAAGCAACAAACACAATACATAACAATTCTAGGTATTTTTGCCTCTATTGTTTTAACATTTGTT
GGGGGATTGGCGTTTTCCACTTCTGTTTTATCAAATATTGACAAAGCGAACGCCTATCGTTTGGTTTTTGTTATGGCTTT
TATAGCTTTATTTTTTGGGAATATTTTGTATCGGCTTTTTTCTTTTTTATCAAAAATATCCTTATCAGAAGAGAAAAAAG
ATAAACAAGAAAATTTTTTCAAAAAACCTATTTTTTGGTTTAATCTAATGGTTATAATTCTATTTGTGATTGGTTTTGTG
GGAGAGAGAATTGATAGGCAATATAAAGCTCATATTTCTAAAGATTTTAAAAGACCAAGATAA

Antitoxin


Download         Length: 101 bp

>AT194881 NZ_CP070976:2258920-2259020 [Bacillus halotolerans]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTGGTACTCATCTGCGTATACGTTTGCGTTGCCTCTTGCTACGGAG
TCGCTTACGTGTACGCTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References