Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprA1-sprA1AS/- |
Location | 1878137..1878317 | Replicon | chromosome |
Accession | NZ_CP069799 | ||
Organism | Staphylococcus aureus strain 014S_SA |
Toxin (Protein)
Gene name | sprA1 | Uniprot ID | - |
Locus tag | JS513_RS09065 | Protein ID | WP_001801861.1 |
Coordinates | 1878137..1878232 (+) | Length | 32 a.a. |
Antitoxin (RNA)
Gene name | sprA1AS | ||
Locus tag | - | ||
Coordinates | 1878260..1878317 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JS513_RS09035 | 1873299..1873949 | + | 651 | WP_072470537.1 | excalibur calcium-binding domain-containing protein | - |
JS513_RS09040 | 1874030..1875025 | + | 996 | WP_000070641.1 | DUF4352 domain-containing protein | - |
JS513_RS09045 | 1875100..1875726 | + | 627 | WP_000669026.1 | hypothetical protein | - |
JS513_RS09050 | 1875767..1876108 | + | 342 | WP_000627537.1 | DUF3969 family protein | - |
JS513_RS09055 | 1876209..1876781 | + | 573 | WP_000414215.1 | hypothetical protein | - |
JS513_RS09060 | 1876980..1877992 | - | 1013 | Protein_1782 | IS3 family transposase | - |
JS513_RS09065 | 1878137..1878232 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin |
- | 1878260..1878317 | - | 58 | - | - | Antitoxin |
JS513_RS09070 | 1878355..1878456 | + | 102 | WP_001792025.1 | hypothetical protein | - |
JS513_RS09075 | 1878434..1878595 | - | 162 | Protein_1785 | transposase | - |
JS513_RS09080 | 1878586..1879080 | - | 495 | Protein_1786 | transposase | - |
JS513_RS09085 | 1879532..1880761 | - | 1230 | WP_047230715.1 | restriction endonuclease subunit S | - |
JS513_RS09090 | 1880754..1882310 | - | 1557 | WP_000028583.1 | type I restriction-modification system subunit M | - |
JS513_RS09095 | 1882475..1882609 | - | 135 | Protein_1789 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | lukD / hlgA / selk | 1872541..1913705 | 41164 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 32 a.a. Molecular weight: 3554.32 Da Isoelectric Point: 10.4449
>T191811 WP_001801861.1 NZ_CP069799:1878137-1878232 [Staphylococcus aureus]
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK
Download Length: 96 bp
>T191811 NZ_CP091925:712550-712846 [Escherichia coli]
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA
Antitoxin
Download Length: 58 bp
>AT191811 NZ_CP069799:c1878317-1878260 [Staphylococcus aureus]
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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