Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) sprA1-sprA1AS/-
Location 1878137..1878317 Replicon chromosome
Accession NZ_CP069799
Organism Staphylococcus aureus strain 014S_SA

Toxin (Protein)


Gene name sprA1 Uniprot ID -
Locus tag JS513_RS09065 Protein ID WP_001801861.1
Coordinates 1878137..1878232 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1878260..1878317 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JS513_RS09035 1873299..1873949 + 651 WP_072470537.1 excalibur calcium-binding domain-containing protein -
JS513_RS09040 1874030..1875025 + 996 WP_000070641.1 DUF4352 domain-containing protein -
JS513_RS09045 1875100..1875726 + 627 WP_000669026.1 hypothetical protein -
JS513_RS09050 1875767..1876108 + 342 WP_000627537.1 DUF3969 family protein -
JS513_RS09055 1876209..1876781 + 573 WP_000414215.1 hypothetical protein -
JS513_RS09060 1876980..1877992 - 1013 Protein_1782 IS3 family transposase -
JS513_RS09065 1878137..1878232 + 96 WP_001801861.1 type I toxin-antitoxin system Fst family toxin PepA1 Toxin
- 1878260..1878317 - 58 - - Antitoxin
JS513_RS09070 1878355..1878456 + 102 WP_001792025.1 hypothetical protein -
JS513_RS09075 1878434..1878595 - 162 Protein_1785 transposase -
JS513_RS09080 1878586..1879080 - 495 Protein_1786 transposase -
JS513_RS09085 1879532..1880761 - 1230 WP_047230715.1 restriction endonuclease subunit S -
JS513_RS09090 1880754..1882310 - 1557 WP_000028583.1 type I restriction-modification system subunit M -
JS513_RS09095 1882475..1882609 - 135 Protein_1789 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - lukD / hlgA / selk 1872541..1913705 41164


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 32 a.a.        Molecular weight: 3554.32 Da        Isoelectric Point: 10.4449

>T191811 WP_001801861.1 NZ_CP069799:1878137-1878232 [Staphylococcus aureus]
VMLIFVHIIAPVISGCAIAFFSYWLSRRNTK

Download         Length: 96 bp

>T191811 NZ_CP091925:712550-712846 [Escherichia coli]
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCCCTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA

Antitoxin


Download         Length: 58 bp

>AT191811 NZ_CP069799:c1878317-1878260 [Staphylococcus aureus]
AACGAAAATAAGTATTTACTTATACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References