Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | TMCS/- |
Location | 1554062..1554641 | Replicon | chromosome |
Accession | NZ_CP069799 | ||
Organism | Staphylococcus aureus strain 014S_SA |
Toxin (Protein)
Gene name | MW1434 | Uniprot ID | A0A4P7P609 |
Locus tag | JS513_RS07455 | Protein ID | WP_001025401.1 |
Coordinates | 1554396..1554641 (-) | Length | 82 a.a. |
Antitoxin (RNA)
Gene name | MW1433 | ||
Locus tag | - | ||
Coordinates | 1554062..1554427 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
JS513_RS07415 | 1550805..1551362 | - | 558 | WP_000645045.1 | DUF2815 family protein | - |
JS513_RS07420 | 1551388..1552554 | - | 1167 | WP_000762531.1 | DUF2800 domain-containing protein | - |
JS513_RS07425 | 1552551..1552913 | - | 363 | WP_204997613.1 | hypothetical protein | - |
JS513_RS07430 | 1552928..1553251 | - | 324 | WP_000174998.1 | hypothetical protein | - |
JS513_RS07435 | 1553330..1553491 | - | 162 | WP_001285954.1 | DUF1270 domain-containing protein | - |
JS513_RS07440 | 1553504..1553767 | - | 264 | WP_001124160.1 | helix-turn-helix domain-containing protein | - |
JS513_RS07445 | 1553792..1554007 | - | 216 | WP_001097552.1 | hypothetical protein | - |
JS513_RS07450 | 1554062..1554427 | + | 366 | WP_001128433.1 | hypothetical protein | Antitoxin |
JS513_RS07455 | 1554396..1554641 | - | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin |
JS513_RS07460 | 1554688..1554927 | + | 240 | WP_001548903.1 | hypothetical protein | - |
JS513_RS07465 | 1554924..1555100 | - | 177 | WP_001001356.1 | hypothetical protein | - |
JS513_RS07470 | 1555184..1555375 | - | 192 | WP_001115060.1 | helix-turn-helix domain-containing protein | - |
JS513_RS07475 | 1555536..1555865 | + | 330 | WP_204997614.1 | helix-turn-helix domain-containing protein | - |
JS513_RS07480 | 1555878..1556339 | + | 462 | WP_000525000.1 | hypothetical protein | - |
JS513_RS07485 | 1556357..1556791 | + | 435 | WP_000755718.1 | hypothetical protein | - |
JS513_RS07490 | 1556820..1557215 | + | 396 | WP_000449655.1 | hypothetical protein | - |
JS513_RS07495 | 1557305..1557451 | + | 147 | WP_001795334.1 | hypothetical protein | - |
JS513_RS07500 | 1557448..1558062 | - | 615 | WP_000191466.1 | hypothetical protein | - |
JS513_RS07505 | 1558188..1559393 | + | 1206 | WP_000264751.1 | site-specific integrase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | lukF-PV / lukS-PV | 1513180..1569924 | 56744 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 82 a.a. Molecular weight: 9468.72 Da Isoelectric Point: 5.7783
>T191808 WP_001025401.1 NZ_CP069799:c1554641-1554396 [Staphylococcus aureus]
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
MNIQEATKIATKNLVSMTRKDWKESHRTKILPTNDSFLQCIISNSDGTNLIRYWQPSADDLMANDWEVINPTRDQELLKQ
F
Download Length: 246 bp
>T191808 NZ_CP091925:182016-182123 [Escherichia coli]
ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA
ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA
Antitoxin
Download Length: 366 bp
>AT191808 NZ_CP069799:1554062-1554427 [Staphylococcus aureus]
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
ATGCCCTTGATATCTGATGAATTTGATACACTTACTAAAGACCAACAATATATCTTGTCCGTACTCTACAAAGATTATTT
AGAATGTGTAAAGTTAGGTTCGGTTAAATTAACCTGCAATAATTTTGGAAGTGCTAAAGATATACATACAAAGTATTTTC
AAAAACTACATTTCGAAGATGTAAAATACGATTTAAATAAACTTAAAAACTCTGGGTTCCTAAACGGCGTGTATGCTAGT
AACACTATTTATCATGTAACAATTTCAGACAAGACTGTTGTTTACTTTGAAAATGAGTTTAAAAACAATTTAAAAAGTAT
CATTGATAGCATTTCTAAAATTGCTTCAATAATTCCTGGTCTCTAG
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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