Detailed information of TA system TA188808

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 2262975..2263189
• Replicon: chromosome
• Accession: NZ_CP068982
• Organism: Bacillus subtilis strain pb2441

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: JNE32_RS11815
• Protein ID: WP_017696861.1
• Coordinates: 2263013..2263189 (-)
• Length: 59 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	2262975..2263072 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
JNE32_RS11785	2258507..2259109	-	603	WP_014472015.1	hypothetical protein	-
JNE32_RS11790	2259111..2260037	-	927	WP_072692938.1	DUF3102 domain-containing protein	-
JNE32_RS11795	2260042..2260896	-	855	WP_072692939.1	hypothetical protein	-
JNE32_RS11800	2261212..2262429	-	1218	WP_250354578.1	hypothetical protein	-
JNE32_RS11805	2262511..2262699	-	189	WP_250354579.1	hypothetical protein	-
JNE32_RS11810	2262744..2262994	-	251	Protein_2282	hypothetical protein	-
-	2262975..2263072	+	98	-	-	Antitoxin
JNE32_RS11815	2263013..2263189	-	177	WP_017696861.1	hypothetical protein	Toxin
-	2263130..2263230	+	101	NuclAT_0	-	-
-	2263130..2263230	+	101	NuclAT_0	-	-
-	2263130..2263230	+	101	NuclAT_0	-	-
-	2263130..2263230	+	101	NuclAT_0	-	-
JNE32_RS11820	2264218..2264412	+	195	WP_072692657.1	hypothetical protein	-
JNE32_RS11825	2264452..2266326	+	1875	Protein_2285	DNA-directed RNA polymerase YonO	-
JNE32_RS11830	2266512..2267414	+	903	WP_072692659.1	NUMOD3 domain-containing DNA-binding protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	2193631..2319454	125823

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 59 a.a.
• Molecular weight: 6878.45 Da
• Isoelectric Point: 12.8833

>T188808 WP_017696861.1 NZ_CP068982:c2263189-2263013 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Nucleotide

• Length: 177 bp

>T188808 NZ_CP090569:c1271896-1271633 [Candidatus Endoriftia persephone]
ATGAGTAGGCATCTCGCCTGGACCGAGGAGGCCTGGGCGGATTATGTCTACTGGCAGGGGCAGGACAGGAAGACCCTCAA
GCGGGTGAACAAACTGATCACTGATGTGCTGCGGACCCCGTTTGAGGGGATCGGTAAGCCGGAAGCGCTGAAGCAGAACT
TATCGGGTTTCTGGTCTCGGCGAATTGATGATACCAACCGCTTGGTTTATGCAGTAACAGATTCGCATGTCACTGTTATT
TCGTGCCGGTATCACTATCAGTAG

Antitoxin

Nucleotide

• Length: 98 bp

>AT188808 NZ_CP068982:2262975-2263072 [Bacillus subtilis]
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT

Structures

Antitoxin