Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 725938..726122 Replicon chromosome
Accession NZ_CP068682
Organism Staphylococcus aureus strain NCCP11854

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A2P7CQJ7
Locus tag JKV48_RS03340 Protein ID WP_000482647.1
Coordinates 725938..726045 (+) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 726062..726122 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JKV48_RS03315 (JKV48_03295) 721300..721773 + 474 WP_000456483.1 GyrI-like domain-containing protein -
JKV48_RS03320 (JKV48_03300) 721896..723107 - 1212 WP_001191921.1 multidrug effflux MFS transporter -
JKV48_RS03325 (JKV48_03305) 723290..723949 - 660 WP_000831298.1 membrane protein -
JKV48_RS03330 (JKV48_03310) 724009..725151 - 1143 WP_001176863.1 glycerate kinase -
JKV48_RS03335 (JKV48_03315) 725419..725805 + 387 WP_000779353.1 flippase GtxA -
JKV48_RS03340 (JKV48_03320) 725938..726045 + 108 WP_000482647.1 type I toxin-antitoxin system Fst family toxin Toxin
- 726062..726122 - 61 - - Antitoxin
JKV48_RS03345 (JKV48_03325) 726693..728405 + 1713 WP_001064821.1 ABC transporter ATP-binding protein -
JKV48_RS03350 (JKV48_03330) 728481..730214 + 1734 WP_000488493.1 ABC transporter ATP-binding protein -
JKV48_RS03355 (JKV48_03335) 730445..730612 + 168 WP_031845053.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 36 a.a.        Molecular weight: 4012.76 Da        Isoelectric Point: 10.4935

>T187514 WP_000482647.1 NZ_CP068682:725938-726045 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T187514 NZ_CP089879:c170091-169621 [Klebsiella pneumoniae]
GTGATCCTCTACAGGCTGACGAAAACAAAGTATCTTTCTACGGCCTGGACCGGATATGGTGCGAAAGAGGCTGGTGGGCG
CTGGAATAGCGTGGGGGTGTCAATGGTATATGTCTCCGAAACAGCATCACTAACGATGCTGGAGACGCTGGTACACCTGC
ATGCGGCACAGATAATGGACTCTTTCACGCTACTGAGTATCGATGTGCCTGATGAACTGATCCAAAGCGCAAACATGGAT
GAATTACCGGACAACTGGGCTGATGAGGATGCGCCTCAGGAACTGGCTGATTACGGAGATGCCTGGTCATTTACCAGGAG
CTCGGTTGCACTGCGTGTTCCCTCAGCCTTATCGCCGGTAGAGTTCAACTATCTGTTAAATCCTGAGCACCCTGAGTTTT
ACGGGATCGTGCAGAAGGCTCAACAGATAGCGTTCCGGTTTGATAGTCGTCTTAAACCTGACAGGAAGTGA

Antitoxin


Download         Length: 61 bp

>AT187514 NZ_CP068682:c726122-726062 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2P7CQJ7


Antitoxin

Download structure file

References