Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 180430..180953 Replicon chromosome
Accession NZ_CP066712
Organism Staphylococcus pseudintermedius strain DSP027

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag JGZ40_RS00805 Protein ID WP_233276563.1
Coordinates 180687..180953 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag JGZ40_RS00800 Protein ID WP_233276562.1
Coordinates 180430..180687 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
JGZ40_RS00775 (JGZ40_00770) 175767..175949 - 183 WP_096536006.1 hypothetical protein -
JGZ40_RS00780 (JGZ40_00775) 176476..177282 + 807 WP_233276559.1 arylamine N-acetyltransferase -
JGZ40_RS00785 (JGZ40_00780) 177576..178070 - 495 WP_015729749.1 isoprenylcysteine carboxylmethyltransferase family protein -
JGZ40_RS00790 178330..178692 + 363 WP_233276560.1 MSCRAMM family adhesin SdrC -
JGZ40_RS00795 179202..180236 + 1035 WP_233276561.1 triacylglycerol lipase -
JGZ40_RS00800 (JGZ40_00790) 180430..180687 + 258 WP_233276562.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
JGZ40_RS00805 (JGZ40_00795) 180687..180953 + 267 WP_233276563.1 Txe/YoeB family addiction module toxin Toxin
JGZ40_RS00810 (JGZ40_00800) 181315..181416 - 102 WP_101431314.1 SE2200 family small protein -
JGZ40_RS00815 (JGZ40_00805) 181430..182923 - 1494 WP_014612817.1 L-lactate dehydrogenase (quinone) -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(25-75)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-68)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10527.05 Da        Isoelectric Point: 10.1602

>T184799 WP_233276563.1 NZ_CP066712:180687-180953 [Staphylococcus pseudintermedius]
MGNYSVLIKNSAKNDLKKIKKSLLKEQFSKIIEVLKINPYEASQSFEKLQPKHSARYSRRLNHQHRVVYTVDDEKREAYI
FSAWSYYE

Download         Length: 267 bp

>T184799 NZ_CP087806:c1853745-1853410 [Moraxella bovis]
ATGTTGCATTTTGCTGAAACATCATTATTCACTAAACAAATCATAGACTTAATGGATGATGACGAGTACAGACTATTACA
AACAAACTTGATGAAAAACCCACATCAAGGCGACATTGTTCGTGGTACTGGCGGAGTACGCAAAACAAGATGGTCAATTG
ATGGCAAGGGCAAAAGTGGTGGCAGTCGCATCATTTACTTTTTTGTTGATGGTGCTGGCATTTTCTTTATGCTCTTGGCT
TATCCTAAATCAAAACAAACAACGCTATCGGCGGATGAGAAAAAAGAAATGCTCAAACTAACCACCGCAATTAAGGAGAT
TTACCGTGCAAAATGA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9852.85 Da        Isoelectric Point: 4.1100

>AT184799 WP_233276562.1 NZ_CP066712:180430-180687 [Staphylococcus pseudintermedius]
MIIKTPTNARKEFYELLKQVNDNHEPIVISGSKSENNAVIVSQEDWDSIQETLFLEYTGTMDKVRAREKDDSGYTNIDDI
DWDNL

Download         Length: 258 bp

>AT184799 NZ_CP087806:c1853420-1853139 [Moraxella bovis]
GTGCAAAATGAGTTTTACGATGATTTAAAAGCCTCATTGACTGAGGCTCTGGCAATCGCTAAGGGCGAAATTTCCCCAAG
TCGTACATTCACTTATGAACGCCCAAACATCAAAGATATTCGGGCAAAAACAGGGCTATCACAAACCCAGTTCGCCCAGA
AGCTACACATAAGCCCTAAAACGCTTAAAAACTGGGAACAGGGCATTAGAACGCCAACAGGTCCAGCCATTACCCTAATT
AGATTACTTGACAAAAACCCTGATTTAATTAGCATGGCATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References