Detailed information of TA system TA183256

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): sprG-sprF/-
• Location: 1776651..1776910
• Replicon: chromosome
• Accession: NZ_CP065710
• Organism: Staphylococcus equorum strain FDAARGOS_884

Toxin (Protein)

• Gene name: SprG2
• Uniprot ID: -
• Locus tag: I6G41_RS09190
• Protein ID: WP_002511402.1
• Coordinates: 1776803..1776910 (-)
• Length: 36 a.a.

Antitoxin (RNA)

Gene name	SprF1
Locus tag	-
Coordinates	1776651..1776813 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
I6G41_RS09160	1772108..1772278	-	171	WP_002507168.1	hypothetical protein	-
I6G41_RS09165	1772773..1773813	+	1041	WP_002507167.1	choloylglycine hydrolase	-
I6G41_RS09170	1774396..1775046	-	651	WP_002507165.1	cytochrome P450	-
I6G41_RS09175	1775024..1775317	-	294	WP_040762580.1	hypothetical protein	-
I6G41_RS09180	1775427..1775582	-	156	WP_002507163.1	hypothetical protein	-
I6G41_RS09185	1775602..1776345	-	744	WP_002507162.1	HAD-IIB family hydrolase	-
-	1776651..1776813	+	163	-	-	Antitoxin
I6G41_RS09190	1776803..1776910	-	108	WP_002511402.1	putative holin-like toxin	Toxin
I6G41_RS09195	1777267..1778118	-	852	WP_002507161.1	DUF4097 family beta strand repeat protein	-
I6G41_RS09200	1778115..1778675	-	561	WP_002511403.1	DUF1700 domain-containing protein	-
I6G41_RS09205	1778744..1779250	-	507	WP_197910790.1	hypothetical protein	-
I6G41_RS09210	1779421..1779981	+	561	WP_002507158.1	thioredoxin family protein	-
I6G41_RS09215	1780064..1780792	-	729	WP_002507157.1	ABC transporter permease subunit	-
I6G41_RS09220	1780792..1781664	-	873	WP_002507156.1	ABC transporter ATP-binding protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Small toxic protein BsrE-like (4-35)

Sequences

Toxin

Protein

• Length: 36 a.a.
• Molecular weight: 3756.72 Da
• Isoelectric Point: 10.4997

>T183256 WP_002511402.1 NZ_CP065710:c1776910-1776803 [Staphylococcus equorum]
VVPIVEALHLMLGFGTFIVTLLGLVVAIVKLSHKK

Nucleotide

• Length: 108 bp

>T183256 NZ_CP086828:30088-30363 [Pseudosulfitobacter pseudonitzschiae]
GTGCCTGACCTTGAATGGAAGGCATTGGCGGTCGCGGACCTGATGGCGATTGTTGACTATATCTCGGATGACAATCCCGA
TGCCGCAATTTCCCTGATGGATGACATTCAAGACAAGGTGCTTGGCCTTCTGACGCATCCCAAATCCGGCCGCCCCGGTA
GGGTGAACGACACGCGAGAGCTGGTGATCCGGCCCAACTATATCGTCGTCTATGCTGAAAACACGGCGGCGGTCACCATT
CTGCGCGTTCTTCATGCGGTGCAGATGTGGCCCTGA

Antitoxin

Nucleotide

• Length: 163 bp

>AT183256 NZ_CP065710:1776651-1776813 [Staphylococcus equorum]
ATTTGATAATATTTTTATGTTGTGGTAATTTATATATAGAAAAAGGGCAACACACCATAAGTGTATCGCCCTAATGAGCC
CGTTAAAAAGACGGTGGCTGGAATTTAATAATGATTAAATAATCATCTCATCCTCGCCAAAGTTAGAGATGGTTATTTTT
TAT

Structures

Antitoxin