Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
Location | 2433838..2434022 | Replicon | chromosome |
Accession | NZ_CP065199 | ||
Organism | Staphylococcus aureus strain DG36 |
Toxin (Protein)
Gene name | SprA2 | Uniprot ID | A0A2P7CQJ7 |
Locus tag | I3K83_RS11970 | Protein ID | WP_000482647.1 |
Coordinates | 2433915..2434022 (-) | Length | 36 a.a. |
Antitoxin (RNA)
Gene name | SprA2AS | ||
Locus tag | - | ||
Coordinates | 2433838..2433898 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
I3K83_RS11955 | 2429368..2429535 | - | 168 | WP_001790576.1 | hypothetical protein | - |
I3K83_RS11960 | 2429766..2431499 | - | 1734 | WP_000486494.1 | ABC transporter ATP-binding protein/permease | - |
I3K83_RS11965 | 2431524..2433287 | - | 1764 | WP_001064816.1 | ABC transporter ATP-binding protein/permease | - |
- | 2433838..2433898 | + | 61 | - | - | Antitoxin |
I3K83_RS11970 | 2433915..2434022 | - | 108 | WP_000482647.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
I3K83_RS11975 | 2434156..2434542 | - | 387 | WP_000779360.1 | flippase GtxA | - |
I3K83_RS11980 | 2434800..2435942 | + | 1143 | WP_001176863.1 | glycerate kinase | - |
I3K83_RS11985 | 2436002..2436661 | + | 660 | WP_000831298.1 | membrane protein | - |
I3K83_RS11990 | 2436843..2438054 | + | 1212 | WP_001192075.1 | multidrug effflux MFS transporter | - |
I3K83_RS11995 | 2438177..2438650 | - | 474 | WP_000456489.1 | GyrI-like domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4012.76 Da Isoelectric Point: 10.4935
>T182307 WP_000482647.1 NZ_CP065199:c2434022-2433915 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T182307 NZ_CP086405:c257593-257306 [Enterobacter roggenkampii]
ATGCATAAATTAACACCTTACGATCCCGCCAACGCGTTGGTGGATGACGAGGAAATCGCCGTGTTTATCGCTGATGCACT
AGAAACAGGCGACTCGACATATATCGCTAAAGCCCTTGGTGTTGTCGCGCGAGCCAAAGGCATGTCGAACATTTCACAGC
AAACCGGTTTATCACGTGAGCAGCTTTATCGGTCATTCAGTGATAAAGGAAACCCAACGCTCAAAACCACGCTCGCGGTC
ATGAAAGCATTGGGTTTTGGGCTAACACTCAAACACGCCGGGGATTAA
ATGCATAAATTAACACCTTACGATCCCGCCAACGCGTTGGTGGATGACGAGGAAATCGCCGTGTTTATCGCTGATGCACT
AGAAACAGGCGACTCGACATATATCGCTAAAGCCCTTGGTGTTGTCGCGCGAGCCAAAGGCATGTCGAACATTTCACAGC
AAACCGGTTTATCACGTGAGCAGCTTTATCGGTCATTCAGTGATAAAGGAAACCCAACGCTCAAAACCACGCTCGCGGTC
ATGAAAGCATTGGGTTTTGGGCTAACACTCAAACACGCCGGGGATTAA
Antitoxin
Download Length: 61 bp
>AT182307 NZ_CP065199:2433838-2433898 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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