181882

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/Txe-RelB
Location 655333..655835 Replicon chromosome
Accession NZ_CP064923
Organism Acaryochloris marina S15

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag I1H34_RS03745 Protein ID WP_212664411.1
Coordinates 655581..655835 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag I1H34_RS03740 Protein ID WP_212666126.1
Coordinates 655333..655581 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
I1H34_RS03715 (I1H34_03710) 650618..650791 - 174 WP_212664406.1 zinc finger domain-containing protein -
I1H34_RS03720 (I1H34_03715) 650929..651096 - 168 WP_212664407.1 hypothetical protein -
I1H34_RS03725 (I1H34_03720) 651210..651650 + 441 WP_212664408.1 DUF29 domain-containing protein -
I1H34_RS03730 (I1H34_03725) 651839..652033 + 195 WP_212664409.1 hypothetical protein -
I1H34_RS03735 (I1H34_03730) 652221..655079 - 2859 WP_249370127.1 isoleucine--tRNA ligase -
I1H34_RS03740 (I1H34_03735) 655333..655581 + 249 WP_212666126.1 type II toxin-antitoxin system Phd/YefM family antitoxin Antitoxin
I1H34_RS03745 (I1H34_03740) 655581..655835 + 255 WP_212664411.1 Txe/YoeB family addiction module toxin Toxin
I1H34_RS03750 (I1H34_03745) 655851..656414 - 564 Protein_597 Uma2 family endonuclease -
I1H34_RS03755 (I1H34_03750) 656506..656898 - 393 WP_212664412.1 hypothetical protein -
I1H34_RS03760 (I1H34_03755) 657039..658679 - 1641 WP_212664413.1 alpha/beta hydrolase -
I1H34_RS03765 (I1H34_03760) 658825..660396 - 1572 WP_212664414.1 CHAT domain-containing protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(4-83)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-69)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 9946.70 Da        Isoelectric Point: 10.2852

>T181882 WP_212664411.1 NZ_CP064923:655581-655835 [Acaryochloris marina S15]
MWTVVLSKQAAKDAKKVSASDLKPKVQKLIAVLQSDPYTLPYEKLVGDMQGYYSRRINIQHRLVYQIFDEQKVIKILRMW
SRYE

Download         Length: 255 bp

>T181882 NZ_CP086196:c2570873-2570592 [Xanthomonas oryzae]
ATGATCAGGAGCTTTATCGACAAGGACGCCGAAAAGATCTGGCTGGGTGAGCGTTCCCGCCGGTTGCCTGCCGACATCCA
ATTGGTCGCGCGCCGCAAGTTGCGCATGCTCAATGCCGCCGCGCATCTCGACGATCTGCGGATCCCGCCCGCCAACCGGC
TGGAAGCGTTGAAGGGCCAGCAGCGCGGCCAGTACAGCATCCGGATCAACGATCAATGGCGCATCTGCTTCCGATGGATG
GAAGGCGATGTGGTCCAGGTCGAAATCGTCGATTACCACTGA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9303.50 Da        Isoelectric Point: 4.1834

>AT181882 WP_212666126.1 NZ_CP064923:655333-655581 [Acaryochloris marina S15]
MDLLTVREARDNLYHLIDEIAEHHKPIVISGKRNDAILISKEDWDAIQETIYLSSIPGMTDSIRTAAAEPVEECIAVENL
DW

Download         Length: 249 bp

>AT181882 NZ_CP086196:c2570574-2570284 [Xanthomonas oryzae]
ATGACGGTCCTACCCAATATCCATCCTGGCGACATTCTGCTTGAGGAGTTTCTCGAGCCTCTGGGCATCAGCCAGAACGC
ACTGGCACGCGCCACCGGCGTCCCGCCGCGCCGTATCAACGAAATCGTGCTGGGCAAGCGCGGCATCACTGCCGACACTG
CCGTGCGTCTGGCCGCCGCGTTGGGCACCTCCGAGCGCTTCTGGCTGGGCCTGCAGGCCGACTACGAGCTGGAACAGGCG
CATCGCGCGCTGGGCGATTTGCCGGCACGGATCAAGCGGCTGGCGGCGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References