Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrG/- |
Location | 112770..112934 | Replicon | plasmid p_unnamed |
Accession | NZ_CP064819 | ||
Organism | Bacillus subtilis strain SH1 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | ITP52_RS22085 | Protein ID | WP_009967548.1 |
Coordinates | 112770..112886 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrG | ||
Locus tag | - | ||
Coordinates | 112881..112934 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ITP52_RS22045 | 108226..108618 | + | 393 | WP_019712881.1 | hypothetical protein | - |
ITP52_RS22050 | 108639..108890 | + | 252 | WP_019712880.1 | phage holin | - |
ITP52_RS22055 | 108942..109835 | + | 894 | Protein_152 | tetratricopeptide repeat protein | - |
ITP52_RS22060 | 109825..110001 | + | 177 | WP_019712878.1 | hypothetical protein | - |
ITP52_RS22065 | 109998..111272 | - | 1275 | WP_128472254.1 | Y-family DNA polymerase | - |
ITP52_RS22070 | 111265..111597 | - | 333 | WP_109962767.1 | YolD-like family protein | - |
ITP52_RS22075 | 111771..112106 | + | 336 | WP_041054825.1 | hypothetical protein | - |
ITP52_RS22080 | 112150..112509 | - | 360 | WP_041338710.1 | hypothetical protein | - |
ITP52_RS22085 | 112770..112886 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- | 112881..112934 | - | 54 | NuclAT_1 | - | Antitoxin |
- | 112881..112934 | - | 54 | NuclAT_1 | - | Antitoxin |
- | 112881..112934 | - | 54 | NuclAT_1 | - | Antitoxin |
- | 112881..112934 | - | 54 | NuclAT_1 | - | Antitoxin |
ITP52_RS22090 | 112978..113436 | - | 459 | WP_109962768.1 | SMI1/KNR4 family protein | - |
ITP52_RS22095 | 113449..115335 | - | 1887 | WP_109962769.1 | HNH endonuclease | - |
ITP52_RS22100 | 115468..116001 | - | 534 | WP_109962770.1 | SMI1/KNR4 family protein | - |
ITP52_RS22105 | 116086..116336 | - | 251 | Protein_162 | PH domain-containing protein | - |
ITP52_RS22110 | 116516..117400 | + | 885 | WP_109962771.1 | endonuclease YokF | - |
ITP52_RS22115 | 117443..117916 | - | 474 | WP_109962772.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | - | - | 1..118493 | 118493 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T181756 WP_009967548.1 NZ_CP064819:112770-112886 [Bacillus subtilis]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T181756 NZ_CP086122:c4717812-4717465 [Pseudomonas aeruginosa]
ATGTCCCCGGTCGTCATTCGTTTTACTGATACCGCAGAGCAAAGCATCGAAGACCAAGTCCACCACTTGGCTCCATTCCA
AGGTGAACAGGCTGCACTCCAGTCAGTACTGAGCCTTTTGGATGAGATTGAAGAGAAGATTTCACTTGCACCTAAAGGTT
ACCCAGTCAGCCAGCAGGCGAGTCTTCTGGGGGTGCTGAGCTATCGCGAGCTTAATACCGGCCCCTATCGTGTTTTTTAC
GAATTCCACGAAGAGCAAGGCGAGGTGGCAGTGATCTTGGTTTTGCGACAGAAGCAGAGCGTTGAGCAGCAATTGATCCG
CTACTGCTTGGTGGGGCCAATCGAGTGA
ATGTCCCCGGTCGTCATTCGTTTTACTGATACCGCAGAGCAAAGCATCGAAGACCAAGTCCACCACTTGGCTCCATTCCA
AGGTGAACAGGCTGCACTCCAGTCAGTACTGAGCCTTTTGGATGAGATTGAAGAGAAGATTTCACTTGCACCTAAAGGTT
ACCCAGTCAGCCAGCAGGCGAGTCTTCTGGGGGTGCTGAGCTATCGCGAGCTTAATACCGGCCCCTATCGTGTTTTTTAC
GAATTCCACGAAGAGCAAGGCGAGGTGGCAGTGATCTTGGTTTTGCGACAGAAGCAGAGCGTTGAGCAGCAATTGATCCG
CTACTGCTTGGTGGGGCCAATCGAGTGA
Antitoxin
Download Length: 54 bp
>AT181756 NZ_CP064819:c112934-112881 [Bacillus subtilis]
AAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAAACTCAAGGGAAGGTCTATTT
AAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAAACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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