Detailed information of TA system TA175342

Bioinformatically predicted

Overview

TA module

• Type: I
• Classification (family/domain): yonT-SR6/-
• Location: 2169563..2169777
• Replicon: chromosome
• Accession: NZ_CP062497
• Organism: Bacillus subtilis strain CV16

Toxin (Protein)

• Gene name: yonT
• Uniprot ID: -
• Locus tag: IHV08_RS11090
• Protein ID: WP_192857822.1
• Coordinates: 2169563..2169739 (-)
• Length: 59 a.a.

Antitoxin (RNA)

Gene name	SR6
Locus tag	-
Coordinates	2169680..2169777 (+)

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
IHV08_RS11040	2164960..2165163	-	204	WP_192857816.1	hypothetical protein	-
IHV08_RS11045	2165295..2165519	-	225	WP_192857817.1	hypothetical protein	-
IHV08_RS11050	2165663..2165998	-	336	WP_192857818.1	hypothetical protein	-
IHV08_RS11055	2166014..2166211	-	198	WP_192857819.1	hypothetical protein	-
IHV08_RS11060	2166242..2166445	-	204	WP_069479623.1	hypothetical protein	-
IHV08_RS11065	2166471..2166749	-	279	WP_153256852.1	hypothetical protein	-
IHV08_RS11070	2167010..2167462	-	453	WP_192857820.1	hypothetical protein	-
IHV08_RS11075	2167786..2169003	-	1218	WP_192857821.1	hypothetical protein	-
IHV08_RS11080	2169091..2169249	-	159	WP_069684683.1	hypothetical protein	-
IHV08_RS11085	2169294..2169509	-	216	WP_120028257.1	hypothetical protein	-
IHV08_RS11090	2169563..2169739	-	177	WP_192857822.1	hypothetical protein	Toxin
-	2169680..2169777	+	98	NuclAT_0	-	Antitoxin
-	2169680..2169777	+	98	NuclAT_0	-	Antitoxin
-	2169680..2169777	+	98	NuclAT_0	-	Antitoxin
-	2169680..2169777	+	98	NuclAT_0	-	Antitoxin
IHV08_RS11095	2170273..2170884	-	612	WP_074794693.1	hypothetical protein	-
IHV08_RS11100	2171085..2171414	-	330	WP_192857823.1	helix-turn-helix domain-containing protein	-
IHV08_RS11105	2172308..2172808	-	501	WP_192857824.1	hypothetical protein	-
IHV08_RS11110	2173182..2173361	+	180	WP_192857825.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Prophage	-	-	2135075..2234382	99307

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

No domain identified.

Sequences

Toxin

Protein

• Length: 59 a.a.
• Molecular weight: 6894.45 Da
• Isoelectric Point: 12.8833

>T175342 WP_192857822.1 NZ_CP062497:c2169739-2169563 [Bacillus subtilis]
VLEKVGIIVSFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Nucleotide

• Length: 177 bp

>T175342 NZ_CP081891:331868-332236 [Klebsiella pneumoniae]
ATGACGCTGCAGATTATCTCAGCGGAAGAGATAATACAGTTTCACGACAGGCTGCTCCGCGTCACGCCTGGCGTTGCCGG
TATGCCCGATCCGGGGCGTGCCGAAGCGATAATGTATAGGGTGCTAAACAAAATTGAATATGAAGGTGTGACAGACGTGT
GGCGACTCGCTGCGATGCATCTGCTGGCGATTTCTCGCGGTCATATATTTAATGATGGTAATAAGCGTACGGCACTGTTT
ATCACCCTGCTTTTTTTAAAGCGAAATGGAATTATATTGCCAGCGAATCCAGACTTCGTCGGCATGACCGTCGAGGCAGC
AGCAGGGCAACTTACCCTGGAACAGATTGTCGCGCGTTTGCGTGGATGA

Antitoxin

Nucleotide

• Length: 98 bp

>AT175342 NZ_CP062497:2169680-2169777 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGAAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCAA
TGACTCTATTATAACATA

Structures

Antitoxin