Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2169525..2169739 | Replicon | chromosome |
Accession | NZ_CP062497 | ||
Organism | Bacillus subtilis strain CV16 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | - |
Locus tag | IHV08_RS11090 | Protein ID | WP_192857822.1 |
Coordinates | 2169563..2169739 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2169525..2169622 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
IHV08_RS11040 | 2164960..2165163 | - | 204 | WP_192857816.1 | hypothetical protein | - |
IHV08_RS11045 | 2165295..2165519 | - | 225 | WP_192857817.1 | hypothetical protein | - |
IHV08_RS11050 | 2165663..2165998 | - | 336 | WP_192857818.1 | hypothetical protein | - |
IHV08_RS11055 | 2166014..2166211 | - | 198 | WP_192857819.1 | hypothetical protein | - |
IHV08_RS11060 | 2166242..2166445 | - | 204 | WP_069479623.1 | hypothetical protein | - |
IHV08_RS11065 | 2166471..2166749 | - | 279 | WP_153256852.1 | hypothetical protein | - |
IHV08_RS11070 | 2167010..2167462 | - | 453 | WP_192857820.1 | hypothetical protein | - |
IHV08_RS11075 | 2167786..2169003 | - | 1218 | WP_192857821.1 | hypothetical protein | - |
IHV08_RS11080 | 2169091..2169249 | - | 159 | WP_069684683.1 | hypothetical protein | - |
IHV08_RS11085 | 2169294..2169509 | - | 216 | WP_120028257.1 | hypothetical protein | - |
- | 2169525..2169622 | + | 98 | - | - | Antitoxin |
IHV08_RS11090 | 2169563..2169739 | - | 177 | WP_192857822.1 | hypothetical protein | Toxin |
- | 2169680..2169777 | + | 98 | NuclAT_0 | - | - |
- | 2169680..2169777 | + | 98 | NuclAT_0 | - | - |
- | 2169680..2169777 | + | 98 | NuclAT_0 | - | - |
- | 2169680..2169777 | + | 98 | NuclAT_0 | - | - |
IHV08_RS11095 | 2170273..2170884 | - | 612 | WP_074794693.1 | hypothetical protein | - |
IHV08_RS11100 | 2171085..2171414 | - | 330 | WP_192857823.1 | helix-turn-helix domain-containing protein | - |
IHV08_RS11105 | 2172308..2172808 | - | 501 | WP_192857824.1 | hypothetical protein | - |
IHV08_RS11110 | 2173182..2173361 | + | 180 | WP_192857825.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2135075..2234382 | 99307 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6894.45 Da Isoelectric Point: 12.8833
>T175339 WP_192857822.1 NZ_CP062497:c2169739-2169563 [Bacillus subtilis]
VLEKVGIIVSFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIIVSFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T175339 NZ_CP081890:c4646581-4646297 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGTGAATAAACGGCTCTAA
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGTGAATAAACGGCTCTAA
Antitoxin
Download Length: 98 bp
>AT175339 NZ_CP062497:2169525-2169622 [Bacillus subtilis]
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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