Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) yonT-SR6/-
Location 2169525..2169739 Replicon chromosome
Accession NZ_CP062497
Organism Bacillus subtilis strain CV16

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag IHV08_RS11090 Protein ID WP_192857822.1
Coordinates 2169563..2169739 (-) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 2169525..2169622 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IHV08_RS11040 2164960..2165163 - 204 WP_192857816.1 hypothetical protein -
IHV08_RS11045 2165295..2165519 - 225 WP_192857817.1 hypothetical protein -
IHV08_RS11050 2165663..2165998 - 336 WP_192857818.1 hypothetical protein -
IHV08_RS11055 2166014..2166211 - 198 WP_192857819.1 hypothetical protein -
IHV08_RS11060 2166242..2166445 - 204 WP_069479623.1 hypothetical protein -
IHV08_RS11065 2166471..2166749 - 279 WP_153256852.1 hypothetical protein -
IHV08_RS11070 2167010..2167462 - 453 WP_192857820.1 hypothetical protein -
IHV08_RS11075 2167786..2169003 - 1218 WP_192857821.1 hypothetical protein -
IHV08_RS11080 2169091..2169249 - 159 WP_069684683.1 hypothetical protein -
IHV08_RS11085 2169294..2169509 - 216 WP_120028257.1 hypothetical protein -
- 2169525..2169622 + 98 - - Antitoxin
IHV08_RS11090 2169563..2169739 - 177 WP_192857822.1 hypothetical protein Toxin
- 2169680..2169777 + 98 NuclAT_0 - -
- 2169680..2169777 + 98 NuclAT_0 - -
- 2169680..2169777 + 98 NuclAT_0 - -
- 2169680..2169777 + 98 NuclAT_0 - -
IHV08_RS11095 2170273..2170884 - 612 WP_074794693.1 hypothetical protein -
IHV08_RS11100 2171085..2171414 - 330 WP_192857823.1 helix-turn-helix domain-containing protein -
IHV08_RS11105 2172308..2172808 - 501 WP_192857824.1 hypothetical protein -
IHV08_RS11110 2173182..2173361 + 180 WP_192857825.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 2135075..2234382 99307


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 59 a.a.        Molecular weight: 6894.45 Da        Isoelectric Point: 12.8833

>T175339 WP_192857822.1 NZ_CP062497:c2169739-2169563 [Bacillus subtilis]
VLEKVGIIVSFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T175339 NZ_CP081890:c4646581-4646297 [Klebsiella pneumoniae]
ATGACCTATGAACTGGAGTTTGATCCACGAGCCTGGCGCGAATGGCAGAAGCCTGGCGAGACGGTCAAAAAACAGTTCAA
AAATAAGCTCCAGCAGATTGTGCAGAATCCGCGAATTGAGTCGACCAGGCTGAGCGATTTACCGGATTGCTACAAAATCA
AGCTTAAGGCGTCAGGTTATCGGTTGGTGTATCAAGTACGAGATAGTGTGGTGGTGGTTTACGTTATTGCCATTGGCAAA
AGAGAGAAAGCGGCCGTTTATCATCAGGTGAATAAACGGCTCTAA

Antitoxin


Download         Length: 98 bp

>AT175339 NZ_CP062497:2169525-2169622 [Bacillus subtilis]
GAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAGCCG
CTTGCGTATACGCTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References