Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | sprG-sprF/- |
Location | 2712107..2712386 | Replicon | chromosome |
Accession | NZ_CP062382 | ||
Organism | Staphylococcus aureus strain NAS_AN_068 |
Toxin (Protein)
Gene name | SprG3 | Uniprot ID | Q2FWA7 |
Locus tag | IF703_RS13535 | Protein ID | WP_001802298.1 |
Coordinates | 2712107..2712211 (+) | Length | 35 a.a. |
Antitoxin (RNA)
Gene name | SprF3 | ||
Locus tag | - | ||
Coordinates | 2712207..2712386 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
IF703_RS13510 | 2707516..2708298 | + | 783 | WP_000908193.1 | ABC transporter ATP-binding protein | - |
IF703_RS13515 | 2708366..2709223 | + | 858 | WP_000370936.1 | HAD family hydrolase | - |
IF703_RS13525 | 2710272..2711399 | + | 1128 | WP_047213687.1 | SAP domain-containing protein | - |
IF703_RS13530 | 2711506..2711946 | + | 441 | Protein_2630 | recombinase family protein | - |
IF703_RS13535 | 2712107..2712211 | + | 105 | WP_001802298.1 | hypothetical protein | Toxin |
- | 2712207..2712386 | - | 180 | - | - | Antitoxin |
IF703_RS13545 | 2712717..2713808 | - | 1092 | WP_047213685.1 | hypothetical protein | - |
IF703_RS13550 | 2714074..2715054 | - | 981 | WP_000019739.1 | CDF family zinc efflux transporter CzrB | - |
IF703_RS13555 | 2715056..2715376 | - | 321 | WP_000003759.1 | Zn(II)-responsive metalloregulatory transcriptional repressor CzrA | - |
IF703_RS13560 | 2715528..2716193 | + | 666 | WP_001024091.1 | SDR family oxidoreductase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 35 a.a. Molecular weight: 3906.77 Da Isoelectric Point: 5.5724
>T174751 WP_001802298.1 NZ_CP062382:2712107-2712211 [Staphylococcus aureus]
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
MLLLERTSMSDFEMLMVVLTIIGLVLISTQDHKK
Download Length: 105 bp
>T174751 NZ_CP081490:c2341958-2341608 [Pseudomonas protegens]
ATGAATGCTCTGTTTATTGAACTACCGGCATTTGCACGATACCGAAAGGACTTCCTTGACGACGAGTTGTTCTGCGAACT
GCAGATCGAGTTGCTGCGCCACCCGCACGCGGGGGTTCTGATTCAGGGCACTGGCGGCTTGCGCAAGATGCGTTTCGTCG
ATGAGCGACGTAACAAGGGCAGGCGTGGCGGGCTGAGAGTGATTTATTACTGGTGGTCCGGAGGGGCGCAGTTCTGGCTC
TTCACCCTGTTCGACAAGGAGCAGATGGACGACCTGCTACCGCAGCAGCGACAACAGCTCAAACAACTGCTGGAACGTGA
AATCGAGGCCAGAAGACATGACCAAACGTGA
ATGAATGCTCTGTTTATTGAACTACCGGCATTTGCACGATACCGAAAGGACTTCCTTGACGACGAGTTGTTCTGCGAACT
GCAGATCGAGTTGCTGCGCCACCCGCACGCGGGGGTTCTGATTCAGGGCACTGGCGGCTTGCGCAAGATGCGTTTCGTCG
ATGAGCGACGTAACAAGGGCAGGCGTGGCGGGCTGAGAGTGATTTATTACTGGTGGTCCGGAGGGGCGCAGTTCTGGCTC
TTCACCCTGTTCGACAAGGAGCAGATGGACGACCTGCTACCGCAGCAGCGACAACAGCTCAAACAACTGCTGGAACGTGA
AATCGAGGCCAGAAGACATGACCAAACGTGA
Antitoxin
Download Length: 180 bp
>AT174751 NZ_CP062382:c2712386-2712207 [Staphylococcus aureus]
GTGTTAAAATATATTTGTAGTAAGTAGAAGTAAAAGATGAAAATCATTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTC
AAAGCGAATAGAAGGTTATT
GTGTTAAAATATATTTGTAGTAAGTAGAAGTAAAAGATGAAAATCATTAACTCTTGAAACACAAAAAGGGCAACACTCGG
AAACATGTTACCCTAATGAGCCCGTTAAAAAGACGGTGACCTTATATTTTATTTAAAAATAGCCTTCAAAAATGCCGGTC
AAAGCGAATAGAAGGTTATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|