Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | yefM-yoeB (relBE)/Txe-RelB |
| Location | 2318601..2319118 | Replicon | chromosome |
| Accession | NZ_CP062370 | ||
| Organism | Staphylococcus aureus strain NAS_AN_111 | ||
Toxin (Protein)
| Gene name | yoeB | Uniprot ID | A0A3A3ATA4 |
| Locus tag | IF711_RS11315 | Protein ID | WP_000113265.1 |
| Coordinates | 2318852..2319118 (+) | Length | 89 a.a. |
Antitoxin (Protein)
| Gene name | yefM | Uniprot ID | T1YB60 |
| Locus tag | IF711_RS11310 | Protein ID | WP_000584499.1 |
| Coordinates | 2318601..2318852 (+) | Length | 84 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IF711_RS11280 (2314299) | 2314299..2315018 | + | 720 | WP_000479576.1 | amino acid ABC transporter permease | - |
| IF711_RS11285 (2315015) | 2315015..2315746 | + | 732 | WP_000615461.1 | amino acid ABC transporter ATP-binding protein | - |
| IF711_RS11290 (2315843) | 2315843..2317093 | - | 1251 | WP_001012225.1 | FemA/FemB family glycyltransferase FmhA | - |
| IF711_RS11295 (2317348) | 2317348..2317710 | + | 363 | WP_000819843.1 | DUF4467 domain-containing protein | - |
| IF711_RS11300 (2317729) | 2317729..2318328 | + | 600 | WP_000162810.1 | DsbA family protein | - |
| IF711_RS11305 (2318356) | 2318356..2318436 | + | 81 | WP_223197974.1 | hypothetical protein | - |
| IF711_RS11310 (2318601) | 2318601..2318852 | + | 252 | WP_000584499.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
| IF711_RS11315 (2318852) | 2318852..2319118 | + | 267 | WP_000113265.1 | Txe/YoeB family addiction module toxin | Toxin |
| IF711_RS11320 (2319153) | 2319153..2319224 | + | 72 | Protein_2200 | hypothetical protein | - |
| IF711_RS11325 (2319413) | 2319413..2320960 | + | 1548 | WP_000727772.1 | zinc ABC transporter substrate-binding lipoprotein AdcA | - |
| IF711_RS11330 (2321146) | 2321146..2321613 | + | 468 | WP_000153347.1 | SRPBCC domain-containing protein | - |
| IF711_RS11335 (2321697) | 2321697..2321879 | + | 183 | WP_000230292.1 | hypothetical protein | - |
| IF711_RS11340 (2322096) | 2322096..2322920 | + | 825 | WP_000572038.1 | formate/nitrite transporter family protein | - |
| IF711_RS11345 (2323154) | 2323154..2323690 | + | 537 | WP_000169317.1 | GNAT family N-acetyltransferase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 89 a.a. Molecular weight: 10436.96 Da Isoelectric Point: 10.0573
>T174669 WP_000113265.1 NZ_CP062370:2318852-2319118 [Staphylococcus aureus]
MARLNITFSPQAFEDYKYFQQNNKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
MARLNITFSPQAFEDYKYFQQNNKKMVKKINELLKSIDRNGALEGIGKPEKLKSNLTGYYSRRINHEHRLVYTVDDNHIK
IASCKYHY
Download Length: 267 bp
>T174669 NZ_CP081343:c12282-11866 [Pantoea ananatis]
GTGAACAGGACTTATATGCTGGACACCTGTATCTGCTCGTTCATCATGCGCGAGCAGCCGGCCGCCGTCATTGAGCGGCT
GGAGCAGGCGGTGCTGCGCGGCCACCGCATCGTGGTCTCGGCCATTACTTACTCTGAAATGCGCTTCGGCGCCACCGGCC
CGAAGGCCTCGCCGCGTCACGTGCAGCTGGTCGAGGAATTCTGCGCCCGGCTCGATGCCGTCCTGCCCTGGGACCGAGCT
GCGGTGGACGCCACCACGGAGATTAAGGTGGTGCTGCGCCTGGCCGGGACGCCGATCGGCCCTAACGACACGGCGATCGC
CGGGCACGCCATCTCCGCGGGCGCCGTGCTGGTAACGAATAATACGCGGGAGTTTGAGCGGGTGCCGGGCCTAGTACTGG
AAGACTGGGTGAAGTAA
GTGAACAGGACTTATATGCTGGACACCTGTATCTGCTCGTTCATCATGCGCGAGCAGCCGGCCGCCGTCATTGAGCGGCT
GGAGCAGGCGGTGCTGCGCGGCCACCGCATCGTGGTCTCGGCCATTACTTACTCTGAAATGCGCTTCGGCGCCACCGGCC
CGAAGGCCTCGCCGCGTCACGTGCAGCTGGTCGAGGAATTCTGCGCCCGGCTCGATGCCGTCCTGCCCTGGGACCGAGCT
GCGGTGGACGCCACCACGGAGATTAAGGTGGTGCTGCGCCTGGCCGGGACGCCGATCGGCCCTAACGACACGGCGATCGC
CGGGCACGCCATCTCCGCGGGCGCCGTGCTGGTAACGAATAATACGCGGGAGTTTGAGCGGGTGCCGGGCCTAGTACTGG
AAGACTGGGTGAAGTAA
Antitoxin
Download Length: 84 a.a. Molecular weight: 9433.60 Da Isoelectric Point: 4.3407
>AT174669 WP_000584499.1 NZ_CP062370:2318601-2318852 [Staphylococcus aureus]
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
MIIKNYSYARQNLKALMTKVNDDSDMVTVTSTDDKNVVIMSESDYNSMMETLYLQQNPNNAEHLAQSIADLERGKTITKD
IDV
Download Length: 252 bp
>AT174669 NZ_CP081343:c12509-12279 [Pantoea ananatis]
ATGAGAACCGTATCTATTTTCAAAAACGGCAATAACCGTGCCATCCGCCTGCCCCGCGATCTGGATTTTGAGGGGGTGAG
TGAGCTGGAGATCGTGCGGGAAGGGGACAGCATCATCCTGCGTCCCGTCCGGCCGACCTGGGGCTCATTCCTGGAGCTTG
AAAAAGCCGATCCGGACTTTATGGCGGAGCGCGAGGACGTTGTCAGCGACGAAGGACGGTTTAACCTGTGA
ATGAGAACCGTATCTATTTTCAAAAACGGCAATAACCGTGCCATCCGCCTGCCCCGCGATCTGGATTTTGAGGGGGTGAG
TGAGCTGGAGATCGTGCGGGAAGGGGACAGCATCATCCTGCGTCCCGTCCGGCCGACCTGGGGCTCATTCCTGGAGCTTG
AAAAAGCCGATCCGGACTTTATGGCGGAGCGCGAGGACGTTGTCAGCGACGAAGGACGGTTTAACCTGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|