Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 801284..801977 Replicon chromosome
Accession NZ_CP061758
Organism Escherichia coli O68:H12 strain 97.3

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag IEC98_RS03825 Protein ID WP_000415584.1
Coordinates 801284..801580 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag IEC98_RS03830 Protein ID WP_000650107.1
Coordinates 801582..801977 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
IEC98_RS03790 796372..796686 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
IEC98_RS03795 796717..797298 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
IEC98_RS03800 797617..797949 + 333 WP_000917684.1 DUF2645 family protein -
IEC98_RS03805 797995..799344 - 1350 WP_001618857.1 two-component system sensor histidine kinase QseC -
IEC98_RS03810 799341..800000 - 660 WP_001221493.1 two-component system response regulator QseB -
IEC98_RS03815 800152..800544 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
IEC98_RS03820 800597..801079 + 483 WP_000183505.1 transcriptional regulator -
IEC98_RS03825 801284..801580 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
IEC98_RS03830 801582..801977 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
IEC98_RS03835 802110..803717 + 1608 WP_001295629.1 ABC transporter substrate-binding protein -
IEC98_RS03840 803855..806113 + 2259 WP_001281881.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T172931 WP_000415584.1 NZ_CP061758:801284-801580 [Escherichia coli O68:H12]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

>T172931 NZ_CP080056:206427-206534 [Escherichia coli]
ATGACGTTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGCTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT172931 WP_000650107.1 NZ_CP061758:801582-801977 [Escherichia coli O68:H12]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp

>AT172931 NZ_CP080056:c206378-206315 [Escherichia coli]
GTCTAGAGTCAAGATTAGCCCCCGTGGTGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References