Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 59657..60350 Replicon plasmid pUnnamed1
Accession NZ_CP060593
Organism Rouxiella badensis strain C173

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag H2866_RS22790 Protein ID WP_192504575.1
Coordinates 60054..60350 (-) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag H2866_RS22785 Protein ID WP_192504574.1
Coordinates 59657..60052 (-) Length 132 a.a.

Genomic Context

H2866_RS22770H2866_RS22760H2866_RS22765H2866_RS22775H2866_RS22780H2866_RS22785H2866_RS22790H2866_RS22795H2866_RS22800H2866_RS22805H2866_RS22810H2866_RS22815H2866_RS22820H2866_RS22825H2866_RS22830H2866_RS22835H2866_RS22840
Location: 57450..57782 (333 bp)
Type: Others
Protein ID: WP_192504571.1
Location: 54908..56869 (1962 bp)
Type: Others
Protein ID: WP_192504570.1
Location: 56869..57180 (312 bp)
Type: Others
Protein ID: WP_017493764.1
Location: 57921..58742 (822 bp)
Type: Others
Protein ID: WP_192504572.1
Location: 58797..59162 (366 bp)
Type: Others
Protein ID: WP_192504573.1
Location: 59657..60052 (396 bp)
Type: Antitoxin
Protein ID: WP_192504574.1
Location: 60054..60350 (297 bp)
Type: Toxin
Protein ID: WP_192504575.1
Location: 60477..60917 (441 bp)
Type: Others
Protein ID: WP_192504490.1
Location: 61044..61358 (315 bp)
Type: Others
Protein ID: WP_192504491.1
Location: 61428..61610 (183 bp)
Type: Others
Protein ID: WP_192504492.1
Location: 61858..62001 (144 bp)
Type: Others
Protein ID: WP_192504493.1
Location: 61994..62506 (513 bp)
Type: Others
Protein ID: WP_192504494.1
Location: 62996..63322 (327 bp)
Type: Others
Protein ID: WP_192504495.1
Location: 63319..63822 (504 bp)
Type: Others
Protein ID: WP_192504496.1
Location: 64270..64506 (237 bp)
Type: Others
Protein ID: WP_192504497.1
Location: 64535..64966 (432 bp)
Type: Others
Protein ID: WP_192504498.1
Location: 65018..65161 (144 bp)
Type: Others
Protein ID: WP_192504499.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
H2866_RS2276054908..56869-1962WP_192504570.1relaxase/mobilization nuclease domain-containing protein-
H2866_RS2276556869..57180-312WP_017493764.1mobilization protein-
H2866_RS2277057450..57782+333WP_192504571.1hypothetical protein-
H2866_RS2277557921..58742-822WP_192504572.1DUF945 domain-containing protein-
H2866_RS2278058797..59162-366WP_192504573.1hypothetical protein-
H2866_RS2278559657..60052-396WP_192504574.1type II toxin-antitoxin system MqsA family antitoxinAntitoxin
H2866_RS2279060054..60350-297WP_192504575.1type II toxin-antitoxin system MqsR family toxinToxin
H2866_RS2279560477..60917-441WP_192504490.1antirestriction protein-
H2866_RS2280061044..61358-315WP_192504491.1hypothetical protein-
H2866_RS2280561428..61610-183WP_192504492.1cobalamin biosynthesis protein CbiX-
H2866_RS2281061858..62001-144WP_192504493.1hypothetical protein-
H2866_RS2281561994..62506-513WP_192504494.1antirestriction protein-
H2866_RS2282062996..63322-327WP_192504495.1hypothetical protein-
H2866_RS2282563319..63822-504WP_192504496.1hypothetical protein-
H2866_RS2283064270..64506-237WP_192504497.1hypothetical protein-
H2866_RS2283564535..64966-432WP_192504498.1hypothetical protein-
H2866_RS2284065018..65161-144WP_192504499.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideConjugative plasmid--1..120691120691


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-45)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 10897.68 Da        Isoelectric Point: 8.5012

>T170518 WP_192504575.1 NZ_CP060593:c60350-60054 [Rouxiella badensis]
MEKKTPHTRLHLVQALVAEGKVRATNTAMNGADELGLTFDGMCDAIKGLKMSDFFKSMTTYNDHTVWQDVYRPTLACGVV
YLKLTVSNGVLIVSFKEK

Download         Length: 297 bp

>T170518 NZ_CP077421:4999652-5000971 [Pectobacterium polaris]
ATGGCTGCGCTCGATGTTTACATGAACGGCTATCGGGTGGGGATTCTGACCAAAACGGGCAGTGGGGCACATCATTTTTC
CTATGATGCGAACTGGCTCGGATTGCCGGGGAGTCGCCCCATTTCGCTTTCTATGCCGCTACGTCATCAGCCCTATCAAG
GTGATGAAGTTTATAACTTCTTCGACAATTTGTTGCCGGATAACCCGGATATCAGAAGACGGATTGTCGCCAGGCATCGC
GCGGATTCCACCCAACCGTTTGATCTGCTGGCTAAAGTGGGGCAAGACAGTGTCGGGGCGTTGCAATTAGTGCCGCAGGG
TACACCTGTGCATGATATAAAAAAGATCGAATACAAAACCTTATCCGAGCAGCAGCTTGAAAACATACTGACCGGATATC
TGTCCGATGCCCCGCTGGGGATGATTGATACTGAAGACGATTTTCGTATTTCTATCGCAGGTGCACAGGAAAAGACGGCG
CTACTTTATCTGGATGATCACTGGCGCCTGCCTCTCAATGCCACACCAACTACCCACATCATCAAGCTACCGATTGGTAA
AATCGAGAGTCACTCTTACTCAATTGATATGTCTGACAGCGTTGAAAATGAGTATCTGTGTTTGCTCATTGCCAAGGCAT
TTGGGCTGCCAGTGCCGCGCTGTTTTATGATCAACGCTGGCAAGATAAAGGCGTTGGCGGTGGAGCGTTTTGATCGTAAA
TACGCCTCGGATGTCAGTTGGATTATGCGGCTACCACAAGAGGATTTTTGTCAGGTATTAAACGTTCCTTCCGCACTGAA
ATATGAAAATCATGGTGGACCGGGTATTTCCGCCATTATGTCGTTTCTATTGGGTTCGGTTGATCCAGAAAGAGATCGTT
ATCGCTTTATGCAGGCTCAGGTACTGTTTTGGCTATTGGCTGCAACGGATGGTCATGCGAAAAACTTTTCCCTGTTTATT
GAATCTGAGGGGCGATATCGACTCACGCCTTTCTATGACATTCTCTCCATGTATCCAGCGATGGGCGGACGGGGAATTGA
CCGCAGAGAAGCCAAACTGGCGATGGGATTGACTGGCTCAAGAGGCAAGAAATATGCGACTGAGCAGATCTTTCCCCGAC
ATTTTTTCCAGACGGCGAAGGCTGTTGGGTTTGCCAGAGAATCGATGGAAAACATTCTGGTGGAGTTTGCCCACGCCATT
GATACCGTCATGACGACTGTTGGAAGTCAACTGCCTGTGGATTTTCCTACTCATATCAGTGAGGCAATTCTGGCCGGGTT
GCAGGCCAGATCGAGACGGCTCATGAGCGGATGGGAGTAA

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14367.53 Da        Isoelectric Point: 8.5023

>AT170518 WP_192504574.1 NZ_CP060593:c60052-59657 [Rouxiella badensis]
MKCSVCGGAELAFGTKKVPYSFRGHKTQIDAEGEHCPACGEVNMDRDQANAYQAKLKAFKAQIIAVTVEPEFIVSVRKKL
ALTQKEASEIFGGGVNAFSRYEKGVAQPHPSTIKLLRVLDHHPELLNEIRG

Download         Length: 396 bp

>AT170518 NZ_CP077421:4999386-4999652 [Pectobacterium polaris]
ATGAAAGTCACCAACAGCAAGCAGCTTAGTAGCTATCTGAAAGATGTCCGTATCACGCAGAAGCTTTCACAAGGGAAAGT
GGCCAGTAAAGTGGGTATTCGCCAGGATACGGTATCCAGTTTCGAGCAACATCCTGATTCCACTAAGCTGGAAACCTTCT
TTAAAATCCTGTCGGCATTGAATTTAGAACTTACTGTTACGCCCAGAAATGTGGACACCACCAATAACGAAGCCTCTGTT
GCATCATCCTGGAAGGAAGAGTGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
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Antitoxin

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Source
ID
Structure
No matching records found

References