Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) higBA (relBE)/HigB-HigA
Location 41514..42241 Replicon plasmid pKP20194a2-p1
Accession NZ_CP054775
Organism Klebsiella pneumoniae strain KP20194a2

Toxin (Protein)


Gene name higB Uniprot ID A0A7W3D9W1
Locus tag HUR99_RS27060 Protein ID WP_011251285.1
Coordinates 41930..42241 (-) Length 104 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag HUR99_RS27055 Protein ID WP_011251286.1
Coordinates 41514..41933 (-) Length 140 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HUR99_RS27025 36682..37152 - 471 WP_048333570.1 hypothetical protein -
HUR99_RS27030 37345..38100 - 756 Protein_38 hypothetical protein -
HUR99_RS27035 38696..39139 + 444 WP_048333569.1 hypothetical protein -
HUR99_RS27040 39160..39948 + 789 WP_040217257.1 hypothetical protein -
HUR99_RS27045 39962..40297 + 336 Protein_41 conjugal transfer protein TraI -
HUR99_RS27050 40399..41367 - 969 WP_074428168.1 IS5 family transposase -
HUR99_RS27055 41514..41933 - 420 WP_011251286.1 helix-turn-helix domain-containing protein Antitoxin
HUR99_RS27060 41930..42241 - 312 WP_011251285.1 type II toxin-antitoxin system HigB family toxin Toxin
HUR99_RS27065 42446..42904 - 459 Protein_45 DDE-type integrase/transposase/recombinase -
HUR99_RS27070 43018..43715 + 698 Protein_46 IS1 family transposase -
HUR99_RS27075 43731..44450 - 720 Protein_47 aldo/keto reductase -
HUR99_RS27080 44447..44926 - 480 WP_004212799.1 hypothetical protein -
HUR99_RS27085 44923..45108 - 186 WP_045145446.1 hypothetical protein -
HUR99_RS27090 45112..45228 + 117 Protein_50 Tn3 family transposase -
HUR99_RS27095 45511..45741 - 231 WP_011154571.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Mobilizable plasmid - iroN / rmpA / iucA / iucB / iucC / iucD / iutA / rmpA2 1..195030 195030
- inside IScluster/Tn - - 22688..43715 21027


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 104 a.a.        Molecular weight: 12346.12 Da        Isoelectric Point: 9.7248

>T160385 WP_011251285.1 NZ_CP054775:c42241-41930 [Klebsiella pneumoniae]
MHVISKEPFEEAAKRYPNDSLAIRALYRLVRETDFSSPAEMLTLIPSLDNFKYRNKWWVLDVGGNNLRVIAYINFVNKRF
YVKHIATHADYDKLTRYYRENKE

Download         Length: 312 bp

>T160385 NZ_CP070482:c2911226-2910876 [Escherichia coli]
ATGGTAAAGAAAAGTGAATTTGAACGGGGAGACATTGTGCTGGTTGGCTTTGATCCAGCAAGCGGCCATGAACAGCAAGG
TGCTGGTCGACCTGCGCTTGTGCTCTCCGTTCAAGCCTTTAATCAACTGGGAATGACGCTGGTGGCCCCCATTACGCAGG
GCGGAAATTTTGCCCGTTATGCCGGATTTAGCGTTCCTTTACATTGCGAAGAAGGCGATGTGCACGGCGTGGTGCTGGTG
AATCAGGTGCGGATGATGGATCTACACGCCCGGCTGGCAAAGCGTATTGGTCTGGCTGCGGATGAGGTGGTGGAAGAGGC
GTTATTACGCTTGCAGGCGGTGGTGGAATAA

Antitoxin


Download         Length: 140 a.a.        Molecular weight: 15377.46 Da        Isoelectric Point: 4.4420

>AT160385 WP_011251286.1 NZ_CP054775:c41933-41514 [Klebsiella pneumoniae]
MITDTAKAIEATKQLVAAVPFLGGSSSESDYREAMELVDYLIENDDENPLIDFLASKIADYEDNSPRFAEFNKAIAEIPV
GVALLRTLIDQHKLSYSDLKDEIGSKSLVSQILSGQRSLTITHIKALSARFGVKPEWFL

Download         Length: 420 bp

>AT160385 NZ_CP070482:c2911471-2911220 [Escherichia coli]
ATGCGTATTACCATAAAAAGATGGGGGAACAGTGCAGGTATGGTCATTCCCAATATCGTAATGAAAGAACTTAACTTACA
GCCGGGGCAGAGCGTGGAGGCGCAAGTGAGCAACAATCAACTGATTCTGACACCCATCTCCAGGCGCTACTCGCTTGATG
AACTGCTGGCACAGTGTGACATGAACGCCGCGGAACTTAGCGAGCAGGATGTCTGGGGTAAATCCACCCCTGCGGGTGAC
GAAATATGGTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A7W3D9W1


Antitoxin

Source ID Structure

References