Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) higBA (relBE)/HigB-HigA
Location 41512..42239 Replicon plasmid pKP20194d-p1
Accession NZ_CP054733
Organism Klebsiella pneumoniae strain KP20194d

Toxin (Protein)


Gene name higB Uniprot ID A0A7W3D9W1
Locus tag HUS06_RS27065 Protein ID WP_011251285.1
Coordinates 41928..42239 (-) Length 104 a.a.

Antitoxin (Protein)


Gene name higA Uniprot ID -
Locus tag HUS06_RS27060 Protein ID WP_011251286.1
Coordinates 41512..41931 (-) Length 140 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HUS06_RS27030 36680..37150 - 471 WP_048333570.1 hypothetical protein -
HUS06_RS27035 37343..38098 - 756 Protein_38 hypothetical protein -
HUS06_RS27040 38694..39137 + 444 WP_048333569.1 hypothetical protein -
HUS06_RS27045 39158..39946 + 789 WP_040217257.1 hypothetical protein -
HUS06_RS27050 39960..40295 + 336 Protein_41 conjugal transfer protein TraI -
HUS06_RS27055 40397..41365 - 969 WP_074428168.1 IS5 family transposase -
HUS06_RS27060 41512..41931 - 420 WP_011251286.1 helix-turn-helix domain-containing protein Antitoxin
HUS06_RS27065 41928..42239 - 312 WP_011251285.1 type II toxin-antitoxin system HigB family toxin Toxin
HUS06_RS27070 42444..42902 - 459 Protein_45 DDE-type integrase/transposase/recombinase -
HUS06_RS27075 43016..43713 + 698 Protein_46 IS1 family transposase -
HUS06_RS27080 43729..44448 - 720 Protein_47 aldo/keto reductase -
HUS06_RS27085 44445..44924 - 480 WP_004212799.1 hypothetical protein -
HUS06_RS27090 44921..45106 - 186 WP_045145446.1 hypothetical protein -
HUS06_RS27095 45110..45226 + 117 Protein_50 Tn3 family transposase -
HUS06_RS27100 45509..45739 - 231 WP_011154571.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Mobilizable plasmid - iroN / rmpA / iucA / iucB / iucC / iucD / iutA / rmpA2 1..194896 194896
- inside IScluster/Tn - - 22562..43713 21151


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.



Sequences


Toxin        


Download         Length: 104 a.a.        Molecular weight: 12346.12 Da        Isoelectric Point: 9.7248

>T160181 WP_011251285.1 NZ_CP054733:c42239-41928 [Klebsiella pneumoniae]
MHVISKEPFEEAAKRYPNDSLAIRALYRLVRETDFSSPAEMLTLIPSLDNFKYRNKWWVLDVGGNNLRVIAYINFVNKRF
YVKHIATHADYDKLTRYYRENKE

Download         Length: 312 bp

>T160181 NZ_CP070338:c2005848-2005504 [Mycobacterium tuberculosis]
GTGGTGATTAGTCGTGCCGAGATCTACTGGGCTGACCTCGGGCCGCCATCAGGCAGTCAGCCGGCGAAGCGCCGCCCGGT
GCTCGTAATCCAGTCAGATCCGTACAACGCAAGTCGCCTTGCCACTGTGATCGCAGCGGTGATCACGTCCAATACGGCGC
TGGCGGCAATGCCCGGCAACGTGTTCTTGCCCGCGACCACAACGCGACTGCCACGTGACTCGGTCGTCAACGTCACGGCG
ATTGTCACGCTCAACAAGACTGACCTCACCGACCGAGTTGGGGAGGTGCCAGCGAGCTTGATGCACGAGGTTGACCGAGG
ACTTCGTCGCGTACTGGACCTTTGA

Antitoxin


Download         Length: 140 a.a.        Molecular weight: 15377.46 Da        Isoelectric Point: 4.4420

>AT160181 WP_011251286.1 NZ_CP054733:c41931-41512 [Klebsiella pneumoniae]
MITDTAKAIEATKQLVAAVPFLGGSSSESDYREAMELVDYLIENDDENPLIDFLASKIADYEDNSPRFAEFNKAIAEIPV
GVALLRTLIDQHKLSYSDLKDEIGSKSLVSQILSGQRSLTITHIKALSARFGVKPEWFL

Download         Length: 420 bp

>AT160181 NZ_CP070338:c2006090-2005842 [Mycobacterium tuberculosis]
ATGAAGACAGCTATTTCTCTGCCGGATGAGACGTTCGATCGGGTATCGCGGCGTGCGAGTGAGCTCGGCATGAGTCGGTC
CGAGTTCTTCACGAAGGCTGCGCAGCGCTACCTGCACGAGCTGGACGCCCAATTGCTCACGGGCCAGATCGACAGGGCTC
TAGAGAGCATCCATGGCACCGACGAAGCGGAGGCCCTCGCCGTGGCCAACGCATACCGCGTGCTAGAAACCATGGACGAT
GAGTGGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A7W3D9W1


Antitoxin

Source ID Structure

References