Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-RelB
Location 286207..286720 Replicon plasmid unnamed2
Accession NZ_CP054616
Organism Azospirillum oryzae strain KACC 14407

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag HUE56_RS02405 Protein ID WP_149199333.1
Coordinates 286454..286720 (+) Length 89 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID A0A6N1ADX4
Locus tag HUE56_RS02400 Protein ID WP_044552781.1
Coordinates 286207..286473 (+) Length 89 a.a.

Genomic Context

HUE56_RS02400HUE56_RS02405HUE56_RS02375HUE56_RS02380HUE56_RS02385HUE56_RS02390HUE56_RS02395HUE56_RS02410HUE56_RS02415HUE56_RS02420HUE56_RS02425HUE56_RS02430
Location: 286207..286473 (267 bp)
Type: Antitoxin
Protein ID: WP_044552781.1
Location: 286454..286720 (267 bp)
Type: Toxin
Protein ID: WP_149199333.1
Location: 281475..282644 (1170 bp)
Type: Others
Protein ID: WP_149199328.1
Location: 282641..284128 (1488 bp)
Type: Others
Protein ID: WP_149199329.1
Location: 284133..284678 (546 bp)
Type: Others
Protein ID: WP_174757030.1
Location: 284709..285359 (651 bp)
Type: Others
Protein ID: WP_149199331.1
Location: 285359..286033 (675 bp)
Type: Others
Protein ID: WP_149199332.1
Location: 286774..287538 (765 bp)
Type: Others
Protein ID: WP_174757032.1
Location: 287601..288305 (705 bp)
Type: Others
Protein ID: WP_149199334.1
Location: 288310..288957 (648 bp)
Type: Others
Protein ID: WP_149199335.1
Location: 289029..289847 (819 bp)
Type: Others
Protein ID: WP_149199390.1
Location: 289926..290837 (912 bp)
Type: Others
Protein ID: WP_149199336.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
HUE56_RS02375281475..282644-1170WP_149199328.1thiolase family protein-
HUE56_RS02380282641..284128-1488WP_149199329.1AMP-binding protein-
HUE56_RS02385284133..284678-546WP_174757030.1biotin transporter BioY-
HUE56_RS02390284709..285359-651WP_149199331.1energy-coupling factor transporter transmembrane protein EcfT-
HUE56_RS02395285359..286033-675WP_149199332.1ATP-binding cassette domain-containing protein-
HUE56_RS02400286207..286473+267WP_044552781.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
HUE56_RS02405286454..286720+267WP_149199333.1Txe/YoeB family addiction module toxinToxin
HUE56_RS02410286774..287538-765WP_174757032.1amino acid ABC transporter ATP-binding protein-
HUE56_RS02415287601..288305-705WP_149199334.1amino acid ABC transporter permease-
HUE56_RS02420288310..288957-648WP_149199335.1amino acid ABC transporter permease-
HUE56_RS02425289029..289847-819WP_149199390.1transporter substrate-binding domain-containing protein-
HUE56_RS02430289926..290837-912WP_149199336.1GntR family transcriptional regulator-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideNon-Mobilizable plasmid--1..668146668146


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-88)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-73)


Sequences

Toxin        


Download         Length: 89 a.a.        Molecular weight: 10338.76 Da        Isoelectric Point: 9.4084

>T159978 WP_149199333.1 NZ_CP054616:286454-286720 [Azospirillum oryzae]
MKKVWTDGAWEDYLYWQKNERAVLKKVNDLIRDTERNPFSGLGKPEPLKEGLAGWWSRRITGEHRLVYRVTGSGDAQALE
ILACRYHY

Download         Length: 267 bp

>T159978 NZ_CP070229:3196271-3196378 [Escherichia coli]
ATGACGCTCGCAGAGCTGGGCATGGCCTTCTGGCATGATTTAGCGGTTCCGGTCATTGCTGGCATTCTTGCCAGTATGAT
CGTGAACTGGCTGAACAAGCGGAAGTAA

Antitoxin


Download         Length: 89 a.a.        Molecular weight: 9798.17 Da        Isoelectric Point: 4.6768

>AT159978 WP_044552781.1 NZ_CP054616:286207-286473 [Azospirillum oryzae]
MGHISYTDLRNNLASVMDEVCDSRAPLTVTRQKGRSVVMISEEEFEGLMETLHLLKSPKNAERLLKGIAQLDAGKGIERD
ILNEEGLD

Download         Length: 267 bp

>AT159978 NZ_CP070229:c3196223-3196157 [Escherichia coli]
GGTCTAGATGCAAGAATGGCCCCCGTGATGTTGTCAGGTGCATACCTGCAACGTGCGGGGGTTTTCT

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
AlphaFold DBA0A6N1ADX4

References