Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 309304..309499 Replicon chromosome
Accession NZ_CP053181
Organism Enterococcus faecalis strain FMAMOB6

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag HLJ13_RS01570 Protein ID WP_015543884.1
Coordinates 309404..309499 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 309304..309369 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HLJ13_RS01555 304930..306678 + 1749 WP_002397549.1 PTS transporter subunit EIIC -
HLJ13_RS01560 306669..308702 + 2034 WP_002397548.1 BglG family transcription antiterminator -
HLJ13_RS01565 308713..309147 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 309304..309369 + 66 - - Antitoxin
HLJ13_RS01570 309404..309499 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
HLJ13_RS01575 309745..311517 + 1773 WP_002405272.1 PTS mannitol-specific transporter subunit IIBC -
HLJ13_RS01580 311532..311969 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
HLJ13_RS01585 311984..313138 + 1155 WP_002386082.1 mannitol-1-phosphate 5-dehydrogenase -
HLJ13_RS01590 313207..314322 - 1116 WP_202504557.1 FAD-dependent oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)


Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T156162 WP_015543884.1 NZ_CP053181:c309499-309404 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T156162 NZ_CP068829:2993808-2993915 [Escherichia coli]
ATGACGCTCACGCAGTTTGCCATGACTTTCTGGCACGACTTGGCAGCACCGATCCTGGCGGGAATTATTACCGCAGCGAT
TGTCAGCTGGTGGCGTAACCGGAAGTAA

Antitoxin


Download         Length: 66 bp

>AT156162 NZ_CP053181:309304-309369 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATCAGTAGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References