Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrG-as-bsrH/- |
Location | 2385953..2386243 | Replicon | chromosome |
Accession | NZ_CP053102 | ||
Organism | Bacillus subtilis subsp. subtilis str. 168 |
Toxin (Protein)
Gene name | bsrG | Uniprot ID | L8EAY0 |
Locus tag | HIR77_RS12445 | Protein ID | WP_009967548.1 |
Coordinates | 2385953..2386069 (+) | Length | 39 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2386064..2386243 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
HIR77_RS12410 | 2381880..2382050 | - | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
HIR77_RS12415 | 2382347..2382664 | - | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
HIR77_RS12420 | 2382766..2384016 | - | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
HIR77_RS12425 | 2384009..2384341 | - | 333 | WP_004398710.1 | YolD-like family protein | - |
HIR77_RS12430 | 2384515..2384850 | + | 336 | WP_004399073.1 | hypothetical protein | - |
HIR77_RS12435 | 2384893..2385249 | - | 357 | WP_004398595.1 | hypothetical protein | - |
HIR77_RS12440 | 2385255..2385722 | - | 468 | WP_003246138.1 | YolA family protein | - |
HIR77_RS12445 | 2385953..2386069 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
- | 2386064..2386243 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2386064..2386243 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2386064..2386243 | - | 180 | NuclAT_1 | - | Antitoxin |
- | 2386064..2386243 | - | 180 | NuclAT_1 | - | Antitoxin |
HIR77_RS12450 | 2386348..2386881 | - | 534 | WP_004399156.1 | GNAT family N-acetyltransferase | - |
HIR77_RS12455 | 2386917..2387495 | - | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
HIR77_RS12460 | 2387559..2388056 | - | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
HIR77_RS12465 | 2388065..2389780 | - | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
HIR77_RS12470 | 2389880..2390437 | - | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
HIR77_RS12475 | 2390521..2390706 | + | 186 | WP_003245951.1 | transposase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2141170..2398767 | 257597 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 4336.39 Da Isoelectric Point: 10.1022
>T156132 WP_009967548.1 NZ_CP053102:2385953-2386069 [Bacillus subtilis subsp. subtilis str. 168]
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
MTVYESLMIMINFGGLILNTVLLIFNIMMIVTSSQKKK
Download Length: 117 bp
>T156132 NZ_CP068828:c883189-882812 [Escherichia coli]
ATGAAAACATTACCCGACACACACGTACGGGAGGCATCGCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTGTC
CCGACTACTGGGCCAGCATTACGGCCTTACGCTGAATGACACACCGTTCGCCGATGAACGTGTGATTGAGCAGCATATTG
AAGCTGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTTGAAAAATACGCACTGGTACGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGCTCTCAGTTAATAAACAGTATTGATATTCTCCGGGCTCGCAGGGCAACCGGCCTGATGACCCGCGA
TAACTACAGAACGGTAAATAACATTACCCAGGGGAAGCATCCGGAGGCGAAACAATGA
ATGAAAACATTACCCGACACACACGTACGGGAGGCATCGCGCTGCCCGTCTCCCGTCACCATCTGGCAGACACTGCTGTC
CCGACTACTGGGCCAGCATTACGGCCTTACGCTGAATGACACACCGTTCGCCGATGAACGTGTGATTGAGCAGCATATTG
AAGCTGGCATTTCACTGTGTGATGCGGTGAACTTTCTCGTTGAAAAATACGCACTGGTACGTACCGACCAGCCGGGATTC
AGCGCCTGTACCCGCTCTCAGTTAATAAACAGTATTGATATTCTCCGGGCTCGCAGGGCAACCGGCCTGATGACCCGCGA
TAACTACAGAACGGTAAATAACATTACCCAGGGGAAGCATCCGGAGGCGAAACAATGA
Antitoxin
Download Length: 180 bp
>AT156132 NZ_CP053102:c2386243-2386064 [Bacillus subtilis subsp. subtilis str. 168]
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
AATGATACAATTATATAATTATTTTTTGCATTTTGTTTAATTAAATGCATAAAATAAAAAGACCAGGGTGTTGGTAGCAC
CCTGGCTCTGTACAAAAGCTGCCCATCAAAGGGCTTGCTCGTTGTCAAATCTGCGTAGGCCTAACCCTTCAGGTGTCCAA
ACTCAAGGGAAGGTCTATTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|