Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 300232..300427 Replicon chromosome
Accession NZ_CP051005
Organism Enterococcus faecalis strain TH4125

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag GRB94_RS01520 Protein ID WP_015543884.1
Coordinates 300332..300427 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 300232..300297 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GRB94_RS01505 295863..297605 + 1743 WP_002401739.1 PTS transporter subunit EIIC -
GRB94_RS01510 297596..299629 + 2034 WP_002355275.1 transcription antiterminator -
GRB94_RS01515 299640..300074 + 435 WP_002355276.1 PTS sugar transporter subunit IIA -
- 300232..300297 + 66 - - Antitoxin
GRB94_RS01520 300332..300427 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
GRB94_RS01525 300673..302445 + 1773 WP_002391520.1 PTS mannitol transporter subunit IICBA -
GRB94_RS01530 302460..302897 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
GRB94_RS01535 302912..304066 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
GRB94_RS01540 304135..305250 - 1116 WP_002377910.1 FAD-binding oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T153529 WP_015543884.1 NZ_CP051005:c300427-300332 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T153529 NZ_CP066947:c4709156-4709004 [Xanthomonas campestris pv. campestris]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTCTCGGCCGGCATGATGACTGGCTGTAACACCATGGCTGGTGC
CGGAAAGGACATGCAGGGTGCGGGTGACAAGGTCGAGAAGACCGCCGACAAATGCAGCGACGGTAAGTGCTAA

Antitoxin


Download         Length: 66 bp

>AT153529 NZ_CP051005:300232-300297 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATCAGTAGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References