Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 1172557..1172718 Replicon chromosome
Accession NZ_CP049802
Organism Staphylococcus warneri strain Cap 100.1

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag G9P47_RS05860 Protein ID WP_015364873.1
Coordinates 1172557..1172652 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1172684..1172718 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
G9P47_RS05850 (G9P47_05870) 1168528..1171461 + 2934 WP_002466810.1 AAA family ATPase -
G9P47_RS05855 (G9P47_05875) 1171461..1172402 + 942 WP_002466800.1 3'-5' exoribonuclease YhaM -
G9P47_RS05860 (G9P47_05880) 1172557..1172652 + 96 WP_015364873.1 type I toxin-antitoxin system Fst family toxin Toxin
- 1172684..1172718 - 35 - - Antitoxin
G9P47_RS05865 (G9P47_05885) 1172804..1173796 - 993 WP_002466825.1 peptidylprolyl isomerase -
G9P47_RS05870 (G9P47_05890) 1173974..1174531 - 558 WP_002466819.1 DUF3267 domain-containing protein -
G9P47_RS05875 (G9P47_05895) 1174726..1175097 - 372 WP_031464024.1 YtxH domain-containing protein -
G9P47_RS05880 (G9P47_05900) 1175175..1175600 - 426 WP_002466803.1 HIT family protein -
G9P47_RS05885 (G9P47_05905) 1175732..1176472 + 741 WP_002466806.1 ABC transporter ATP-binding protein -
G9P47_RS05890 (G9P47_05910) 1176465..1177688 + 1224 WP_002466814.1 ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3610.26 Da        Isoelectric Point: 8.0878

>T151618 WP_015364873.1 NZ_CP049802:1172557-1172652 [Staphylococcus warneri]
MTEIFVHIATTVISGCIVTLFAHWLRHRNDK

Download         Length: 96 bp

>T151618 NZ_CP065616:132268-132543 [Escherichia coli]
ATGGAACTGAAGTGGACCAGTAAGGCACTTTCTGATTTGGCGCGGTTATATGATTTTCTGGTGCTGGCCAGTAAACCTGC
TGCCGCCAGAACGGTGCAGTCCCTGACACAGGCGCCGGTCATTCTGTTAACTCATCCACGTATGGGAGAACAGTTGTTTC
AGTTTGAACCCAGGGAGGTCAGACGGATTTTTACTGGCGAGTACGAAATCCGTTACGAACTTACTGGCCAGACTATTTAT
GTATTGCGCCTGTGGCACACACGAGAGAACAGGTAG

Antitoxin


Download         Length: 35 bp

>AT151618 NZ_CP049802:c1172718-1172684 [Staphylococcus warneri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References