Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | higBA (relBE)/HigB-HigA |
| Location | 3846325..3846982 | Replicon | chromosome |
| Accession | NZ_CP049188 | ||
| Organism | Enterobacter hormaechei strain Y323 | ||
Toxin (Protein)
| Gene name | higB | Uniprot ID | - |
| Locus tag | G5C52_RS18265 | Protein ID | WP_063978808.1 |
| Coordinates | 3846683..3846982 (-) | Length | 100 a.a. |
Antitoxin (Protein)
| Gene name | higA | Uniprot ID | A0A0F0ZCT3 |
| Locus tag | G5C52_RS18260 | Protein ID | WP_022651701.1 |
| Coordinates | 3846325..3846672 (-) | Length | 116 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G5C52_RS18235 | 3841660..3842658 | + | 999 | WP_045346167.1 | transketolase family protein | - |
| G5C52_RS18240 | 3842733..3843464 | + | 732 | WP_137048338.1 | class I SAM-dependent methyltransferase | - |
| G5C52_RS18245 | 3843461..3844063 | - | 603 | WP_164474400.1 | short chain dehydrogenase | - |
| G5C52_RS18250 | 3844161..3845048 | + | 888 | WP_032660046.1 | LysR family transcriptional regulator | - |
| G5C52_RS18255 | 3845068..3846249 | + | 1182 | WP_022651702.1 | PLP-dependent aminotransferase family protein | - |
| G5C52_RS18260 | 3846325..3846672 | - | 348 | WP_022651701.1 | HigA family addiction module antidote protein | Antitoxin |
| G5C52_RS18265 | 3846683..3846982 | - | 300 | WP_063978808.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| G5C52_RS18270 | 3847233..3848393 | - | 1161 | WP_100154277.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| G5C52_RS18275 | 3848413..3850605 | - | 2193 | WP_045346161.1 | type I secretion system permease/ATPase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 100 a.a. Molecular weight: 11606.25 Da Isoelectric Point: 9.6776
>T150864 WP_063978808.1 NZ_CP049188:c3846982-3846683 [Enterobacter hormaechei]
MINHFRDQWLEDFFLYGRSSNVIPLNLETALARKLDIINAAMSHLDLRSPPGNIYEALSPPLKGYSSIRVNRQYRLVFRW
SEGKADDLYLSPHKYTQHK
MINHFRDQWLEDFFLYGRSSNVIPLNLETALARKLDIINAAMSHLDLRSPPGNIYEALSPPLKGYSSIRVNRQYRLVFRW
SEGKADDLYLSPHKYTQHK
Download Length: 300 bp
>T150864 NZ_CP065058:c1516621-1515860 [Streptococcus equi subsp. zooepidemicus]
ATGCGGTTAGAAGAATTTAGCAAAGATGACTTTGACTTAGCCTTAAAACGAACTATTCGTTCCTTAACTCGTGGTACAAC
GACATCAGTTACCCCAAAAGCCATCTTACTTGGTGGGCAAAGCGGAGCAGGTAAGACAACGATACACCGTATCAAGCAGA
AAGAATTTCAAGGCAATATTATCATTATTGATGGAGATAGTTACCGCTCTTTACACCCAAATTATCTAGCTTTGCAAGAA
GAATACGGAAAAGATAGCGTGGATTATACTAAAGGTTTTGCAGGAAAAATGGTTGAACATCTTGTGGATGAGTTAAGTAA
ACAAGGTTATCATTTGTTAATTGAAGGAACCTTAAGAACGACAGAAATCCCAAGAAAAACAGCTCGGCTATTGAAGGCGA
GAGGTTATCAAGTCTCGTTAGCTTTGATAGCAACTAAGCCTGAATTATCCTATCTCAGCACTTTAATTCGCTATGAGGAA
GTCTATGTGGTGAATCCAAGCCAGGCTAGAGCAACTCCTAAAGAACATCACGATGGTATTGTAGAGTATTTAGTTTCTAA
CTTACGAAAGTTAGAAACTGATAAACTCTTTGACCAGATTCAAATATATCAAAGGGATAGAACCTGTGTTTATGATTCTG
GAATGGATGAAGGCTCAGCTGCTGATGTCCTACAAGACTGTCTTTTCGGAAAGTGGAGTAAGGTGGAGGAAGAGATGTTG
AAGGTGGGGGAAGAGCAACTTAATGAATTACTTAAAAAATAA
ATGCGGTTAGAAGAATTTAGCAAAGATGACTTTGACTTAGCCTTAAAACGAACTATTCGTTCCTTAACTCGTGGTACAAC
GACATCAGTTACCCCAAAAGCCATCTTACTTGGTGGGCAAAGCGGAGCAGGTAAGACAACGATACACCGTATCAAGCAGA
AAGAATTTCAAGGCAATATTATCATTATTGATGGAGATAGTTACCGCTCTTTACACCCAAATTATCTAGCTTTGCAAGAA
GAATACGGAAAAGATAGCGTGGATTATACTAAAGGTTTTGCAGGAAAAATGGTTGAACATCTTGTGGATGAGTTAAGTAA
ACAAGGTTATCATTTGTTAATTGAAGGAACCTTAAGAACGACAGAAATCCCAAGAAAAACAGCTCGGCTATTGAAGGCGA
GAGGTTATCAAGTCTCGTTAGCTTTGATAGCAACTAAGCCTGAATTATCCTATCTCAGCACTTTAATTCGCTATGAGGAA
GTCTATGTGGTGAATCCAAGCCAGGCTAGAGCAACTCCTAAAGAACATCACGATGGTATTGTAGAGTATTTAGTTTCTAA
CTTACGAAAGTTAGAAACTGATAAACTCTTTGACCAGATTCAAATATATCAAAGGGATAGAACCTGTGTTTATGATTCTG
GAATGGATGAAGGCTCAGCTGCTGATGTCCTACAAGACTGTCTTTTCGGAAAGTGGAGTAAGGTGGAGGAAGAGATGTTG
AAGGTGGGGGAAGAGCAACTTAATGAATTACTTAAAAAATAA
Antitoxin
Download Length: 116 a.a. Molecular weight: 13096.09 Da Isoelectric Point: 9.5932
>AT150864 WP_022651701.1 NZ_CP049188:c3846672-3846325 [Enterobacter hormaechei]
MTLQQALRKPTTPGEVLQYEYLEPLNLKINDLAEMLNVHRNTVSALVNNNRKLTADMAIKLAKAFNTTIEFWLNLQLNVD
IWEAQSNSRTQEELSRIKTVAEVMAKRKSGKPDVA
MTLQQALRKPTTPGEVLQYEYLEPLNLKINDLAEMLNVHRNTVSALVNNNRKLTADMAIKLAKAFNTTIEFWLNLQLNVD
IWEAQSNSRTQEELSRIKTVAEVMAKRKSGKPDVA
Download Length: 348 bp
>AT150864 NZ_CP065058:c1517097-1516621 [Streptococcus equi subsp. zooepidemicus]
ATGATTGGAGATAATATCAAATCGTTACGTAAAACCCATGATTTAACGCAACCAGAGTTTGCTAAGATAGTGGGGATTTC
ACGTAATAGCCTTAGCCGTTATGAAAATGGGACAAGCTCTGTTTCAACAGAACTAATAGATCGTATTTGTCAGAAATTCA
ACGTGTCTTATGTTGATATTGTAGGAGAAGAAAAAATGTTAACACCAGTAGAAGATTATCAATTAACGTTAAAAATAGAA
GTCATTAAAGAGCGCGGTGCAGCGATTTTATCCCAACTATATCGCTATCAGGATAGTCAAGGGATTGCTTTTGACGATGA
GACTAATCCTTGGATTCTGATGAGTGATGACTTGTCAGACCTTATCAATACAAAGATTTACCTTGTCGATACTTTTGATG
AAGTGGAGCGTTACAATGGTTATTTAGATGGTATTGAGCGAATGTTGGAGCTTGCTCATCATCAGGTGGTGGCTTAA
ATGATTGGAGATAATATCAAATCGTTACGTAAAACCCATGATTTAACGCAACCAGAGTTTGCTAAGATAGTGGGGATTTC
ACGTAATAGCCTTAGCCGTTATGAAAATGGGACAAGCTCTGTTTCAACAGAACTAATAGATCGTATTTGTCAGAAATTCA
ACGTGTCTTATGTTGATATTGTAGGAGAAGAAAAAATGTTAACACCAGTAGAAGATTATCAATTAACGTTAAAAATAGAA
GTCATTAAAGAGCGCGGTGCAGCGATTTTATCCCAACTATATCGCTATCAGGATAGTCAAGGGATTGCTTTTGACGATGA
GACTAATCCTTGGATTCTGATGAGTGATGACTTGTCAGACCTTATCAATACAAAGATTTACCTTGTCGATACTTTTGATG
AAGTGGAGCGTTACAATGGTTATTTAGATGGTATTGAGCGAATGTTGGAGCTTGCTCATCATCAGGTGGTGGCTTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|