Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 700368..700552 Replicon chromosome
Accession NZ_CP048643
Organism Staphylococcus aureus strain SR153

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A2U0ISP5
Locus tag GAU34_RS03290 Protein ID WP_000482652.1
Coordinates 700368..700475 (+) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 700492..700552 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GAU34_RS03265 695730..696203 + 474 WP_000456486.1 GyrI-like domain-containing protein -
GAU34_RS03270 696326..697537 - 1212 WP_001192075.1 multidrug effflux MFS transporter -
GAU34_RS03275 697719..698378 - 660 WP_000831298.1 membrane protein -
GAU34_RS03280 698438..699580 - 1143 WP_164094421.1 glycerate kinase -
GAU34_RS03285 699848..700234 + 387 WP_000779360.1 flippase GtxA -
GAU34_RS03290 700368..700475 + 108 WP_000482652.1 type I toxin-antitoxin system Fst family toxin Toxin
- 700492..700552 - 61 - - Antitoxin
GAU34_RS03295 701178..702941 + 1764 WP_001064825.1 ABC transporter ATP-binding protein/permease -
GAU34_RS03300 702966..704699 + 1734 WP_063653200.1 ABC transporter ATP-binding protein/permease -
GAU34_RS03305 704930..705097 + 168 Protein_657 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 36 a.a.        Molecular weight: 4011.78 Da        Isoelectric Point: 11.0582

>T149794 WP_000482652.1 NZ_CP048643:700368-700475 [Staphylococcus aureus]
MFNLLINIMTSALSGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T149794 NZ_CP064246:4203208-4203426 [Klebsiella pneumoniae]
ATGTCTGATAAGCCATTAACTAAAACAGACTATTTGATGCGCTTACGTCGTTGCCAGACAATTGACACGCTGGAGCGCGT
CATTGAAAAAAATAAATATGAACTGTCTGATAATGAGCTGGCGGTATTTTACTCAGCTGCCGACCATCGTCTGGCGGAAC
TGACCATGAATAAGCTATACGATAAAATCCCGACTTCTGTCTGGAAATTTATCCGCTAA

Antitoxin


Download         Length: 61 bp

>AT149794 NZ_CP048643:c700552-700492 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2U0ISP5


Antitoxin

Download structure file

References