Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) SprA2-SprA2AS/-
Location 2171266..2171450 Replicon chromosome
Accession NZ_CP047802
Organism Staphylococcus aureus strain UP_1442

Toxin (Protein)


Gene name SprA2 Uniprot ID A0A2U0ISP5
Locus tag E3S67_RS11105 Protein ID WP_000482652.1
Coordinates 2171343..2171450 (-) Length 36 a.a.

Antitoxin (RNA)


Gene name SprA2AS
Locus tag -
Coordinates 2171266..2171326 (+)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E3S67_RS11090 2166721..2166888 - 168 Protein_2131 hypothetical protein -
E3S67_RS11095 2167119..2168852 - 1734 WP_000486487.1 ABC transporter ATP-binding protein/permease -
E3S67_RS11100 2168877..2170640 - 1764 WP_001064825.1 ABC transporter ATP-binding protein/permease -
- 2171266..2171326 + 61 - - Antitoxin
E3S67_RS11105 2171343..2171450 - 108 WP_000482652.1 type I toxin-antitoxin system Fst family toxin Toxin
E3S67_RS11110 2171584..2171970 - 387 WP_000779360.1 flippase GtxA -
E3S67_RS11115 2172238..2173380 + 1143 WP_001176863.1 glycerate kinase -
E3S67_RS11120 2173440..2174099 + 660 WP_000831298.1 membrane protein -
E3S67_RS11125 2174281..2175492 + 1212 WP_001192075.1 multidrug effflux MFS transporter -
E3S67_RS11130 2175615..2176088 - 474 WP_000456486.1 GyrI-like domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 36 a.a.        Molecular weight: 4011.78 Da        Isoelectric Point: 11.0582

>T147951 WP_000482652.1 NZ_CP047802:c2171450-2171343 [Staphylococcus aureus]
MFNLLINIMTSALSGCLVAFFAHWLRTRNNKKGDK

Download         Length: 108 bp

>T147951 NZ_CP063380:c984947-984639 [Pectobacterium versatile]
ATGCAATATAAAGTTTACCGTAATAACGGTAACAGCAACTCATACCCTTACCTGCTCAACATCCAAAGTGACATCATCGG
GGAATTACATACCCGCTTGGTGATACCGTTGTTTCCACTACACAAAATTGCCAGACCACCAGCTCGAAGGCTAACGCCGA
TAGTCACTGTCGAAGGCAACGATTACCTGATAATGACCCATGAAATGGCGAGCGTACGCCGCTCACAACTTGGCCATGAA
GTTATGGATGCGCAGGTGTACCGAAAAACAATCAAGGACGCCGTTGATTTCCTGCTTGATGGGTTCTAA

Antitoxin


Download         Length: 61 bp

>AT147951 NZ_CP047802:2171266-2171326 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A2U0ISP5


Antitoxin

Download structure file

References