Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
| Location | 2171266..2171450 | Replicon | chromosome |
| Accession | NZ_CP047802 | ||
| Organism | Staphylococcus aureus strain UP_1442 | ||
Toxin (Protein)
| Gene name | SprA2 | Uniprot ID | A0A2U0ISP5 |
| Locus tag | E3S67_RS11105 | Protein ID | WP_000482652.1 |
| Coordinates | 2171343..2171450 (-) | Length | 36 a.a. |
Antitoxin (RNA)
| Gene name | SprA2AS | ||
| Locus tag | - | ||
| Coordinates | 2171266..2171326 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| E3S67_RS11090 | 2166721..2166888 | - | 168 | Protein_2131 | hypothetical protein | - |
| E3S67_RS11095 | 2167119..2168852 | - | 1734 | WP_000486487.1 | ABC transporter ATP-binding protein/permease | - |
| E3S67_RS11100 | 2168877..2170640 | - | 1764 | WP_001064825.1 | ABC transporter ATP-binding protein/permease | - |
| - | 2171266..2171326 | + | 61 | - | - | Antitoxin |
| E3S67_RS11105 | 2171343..2171450 | - | 108 | WP_000482652.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
| E3S67_RS11110 | 2171584..2171970 | - | 387 | WP_000779360.1 | flippase GtxA | - |
| E3S67_RS11115 | 2172238..2173380 | + | 1143 | WP_001176863.1 | glycerate kinase | - |
| E3S67_RS11120 | 2173440..2174099 | + | 660 | WP_000831298.1 | membrane protein | - |
| E3S67_RS11125 | 2174281..2175492 | + | 1212 | WP_001192075.1 | multidrug effflux MFS transporter | - |
| E3S67_RS11130 | 2175615..2176088 | - | 474 | WP_000456486.1 | GyrI-like domain-containing protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4011.78 Da Isoelectric Point: 11.0582
>T147951 WP_000482652.1 NZ_CP047802:c2171450-2171343 [Staphylococcus aureus]
MFNLLINIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLINIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T147951 NZ_CP063380:c984947-984639 [Pectobacterium versatile]
ATGCAATATAAAGTTTACCGTAATAACGGTAACAGCAACTCATACCCTTACCTGCTCAACATCCAAAGTGACATCATCGG
GGAATTACATACCCGCTTGGTGATACCGTTGTTTCCACTACACAAAATTGCCAGACCACCAGCTCGAAGGCTAACGCCGA
TAGTCACTGTCGAAGGCAACGATTACCTGATAATGACCCATGAAATGGCGAGCGTACGCCGCTCACAACTTGGCCATGAA
GTTATGGATGCGCAGGTGTACCGAAAAACAATCAAGGACGCCGTTGATTTCCTGCTTGATGGGTTCTAA
ATGCAATATAAAGTTTACCGTAATAACGGTAACAGCAACTCATACCCTTACCTGCTCAACATCCAAAGTGACATCATCGG
GGAATTACATACCCGCTTGGTGATACCGTTGTTTCCACTACACAAAATTGCCAGACCACCAGCTCGAAGGCTAACGCCGA
TAGTCACTGTCGAAGGCAACGATTACCTGATAATGACCCATGAAATGGCGAGCGTACGCCGCTCACAACTTGGCCATGAA
GTTATGGATGCGCAGGTGTACCGAAAAACAATCAAGGACGCCGTTGATTTCCTGCTTGATGGGTTCTAA
Antitoxin
Download Length: 61 bp
>AT147951 NZ_CP047802:2171266-2171326 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|