Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
Location | 2377700..2377884 | Replicon | chromosome |
Accession | NZ_CP047797 | ||
Organism | Staphylococcus aureus strain UP_426 |
Toxin (Protein)
Gene name | SprA2 | Uniprot ID | A0A2P7CQJ7 |
Locus tag | E3S77_RS11520 | Protein ID | WP_000482647.1 |
Coordinates | 2377700..2377807 (+) | Length | 36 a.a. |
Antitoxin (RNA)
Gene name | SprA2AS | ||
Locus tag | - | ||
Coordinates | 2377824..2377884 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
E3S77_RS11495 | 2373068..2373541 | + | 474 | WP_000456493.1 | GyrI-like domain-containing protein | - |
E3S77_RS11500 | 2373664..2374875 | - | 1212 | WP_001191927.1 | multidrug effflux MFS transporter | - |
E3S77_RS11505 | 2375057..2375710 | - | 654 | WP_107399837.1 | hypothetical protein | - |
E3S77_RS11510 | 2375770..2376912 | - | 1143 | WP_001176870.1 | glycerate kinase | - |
E3S77_RS11515 | 2377180..2377566 | + | 387 | WP_000779353.1 | flippase GtxA | - |
E3S77_RS11520 | 2377700..2377807 | + | 108 | WP_000482647.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
- | 2377824..2377884 | - | 61 | - | - | Antitoxin |
E3S77_RS11525 | 2378511..2380274 | + | 1764 | WP_031927727.1 | ABC transporter ATP-binding protein/permease | - |
E3S77_RS11530 | 2380299..2382032 | + | 1734 | WP_000486497.1 | ABC transporter ATP-binding protein/permease | - |
E3S77_RS11535 | 2382263..2382430 | + | 168 | WP_031927726.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4012.76 Da Isoelectric Point: 10.4935
>T147861 WP_000482647.1 NZ_CP047797:2377700-2377807 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T147861 NZ_CP063341:c2486064-2485888 [Escherichia coli]
GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAG
GTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAAC
AACTCGGTTTGAGTTAA
GTGAAACAAAGCGAGTTCAGACGTTGGCTCGAATCTCAGGGCGTCGATGTAGCGAATGGCAGCAACCATTTGAAACTCAG
GTTTCATGGGAGGCGCAGTGTCATGCCGCGTCACCCCTGCGATGAGATTAAAGAACCATTGCGTAAAGCAATCCTGAAAC
AACTCGGTTTGAGTTAA
Antitoxin
Download Length: 61 bp
>AT147861 NZ_CP047797:c2377884-2377824 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|