Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
Location | 2128789..2128973 | Replicon | chromosome |
Accession | NZ_CP047792 | ||
Organism | Staphylococcus aureus strain UP_794 |
Toxin (Protein)
Gene name | SprA2 | Uniprot ID | A0A2P7CQJ7 |
Locus tag | E3S88_RS10695 | Protein ID | WP_000482647.1 |
Coordinates | 2128866..2128973 (-) | Length | 36 a.a. |
Antitoxin (RNA)
Gene name | SprA2AS | ||
Locus tag | - | ||
Coordinates | 2128789..2128849 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
E3S88_RS10680 | 2124338..2124505 | - | 168 | Protein_2051 | hypothetical protein | - |
E3S88_RS10685 | 2124736..2126469 | - | 1734 | WP_124780729.1 | ABC transporter ATP-binding protein/permease | - |
E3S88_RS10690 | 2126494..2128257 | - | 1764 | WP_124780727.1 | ABC transporter ATP-binding protein/permease | - |
- | 2128789..2128849 | + | 61 | - | - | Antitoxin |
E3S88_RS10695 | 2128866..2128973 | - | 108 | WP_000482647.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
E3S88_RS10700 | 2129107..2129493 | - | 387 | WP_000779350.1 | flippase GtxA | - |
E3S88_RS10705 | 2129761..2130903 | + | 1143 | WP_001176863.1 | glycerate kinase | - |
E3S88_RS10710 | 2130963..2131622 | + | 660 | WP_000831300.1 | hypothetical protein | - |
E3S88_RS10715 | 2131806..2133017 | + | 1212 | WP_124780723.1 | multidrug effflux MFS transporter | - |
E3S88_RS10720 | 2133140..2133613 | - | 474 | WP_124780721.1 | GyrI-like domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4012.76 Da Isoelectric Point: 10.4935
>T147783 WP_000482647.1 NZ_CP047792:c2128973-2128866 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T147783 NZ_CP063277:c86374-85991 [Klebsiella pneumoniae]
ATGACCTCCGGATCTGCGCTTTTTGATACCAATATTCTTATTGATTTATTTAGCGGGCGTTGCGAAGCCAAACAGGCGCT
GGAGGCCTGGCCACCGCAGAATGCGATCAGTCTGATTACCTGGATGGAGGTGATGGTTGGCGCTAAAAAATATCACCAGG
AGCAGCGCACGCGAATGGCGCTGAGCACCTTTAATATCATTAACATCTCACAGGATATTGCAGAGCGAAGCGTTGCGCTG
CGGCAGGAGTATAAGCTTAAGCTGCCGGATGCCATCATTCTGGCGACGGCGCAACTCCATCGTCTGGAACTAATTACGCG
GAATACGAAGGGTTTTGCCGGTATTCCTGGCGTAGTCACGCCGTACGAAATCCACCCTGAATAA
ATGACCTCCGGATCTGCGCTTTTTGATACCAATATTCTTATTGATTTATTTAGCGGGCGTTGCGAAGCCAAACAGGCGCT
GGAGGCCTGGCCACCGCAGAATGCGATCAGTCTGATTACCTGGATGGAGGTGATGGTTGGCGCTAAAAAATATCACCAGG
AGCAGCGCACGCGAATGGCGCTGAGCACCTTTAATATCATTAACATCTCACAGGATATTGCAGAGCGAAGCGTTGCGCTG
CGGCAGGAGTATAAGCTTAAGCTGCCGGATGCCATCATTCTGGCGACGGCGCAACTCCATCGTCTGGAACTAATTACGCG
GAATACGAAGGGTTTTGCCGGTATTCCTGGCGTAGTCACGCCGTACGAAATCCACCCTGAATAA
Antitoxin
Download Length: 61 bp
>AT147783 NZ_CP047792:2128789-2128849 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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