Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrH/- |
Location | 2211495..2211712 | Replicon | chromosome |
Accession | NZ_CP045823 | ||
Organism | Bacillus subtilis strain MB8_B1 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | - |
Locus tag | GII79_RS11335 | Protein ID | WP_017696861.1 |
Coordinates | 2211495..2211671 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2211612..2211712 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
GII79_RS11315 | 2207518..2209389 | - | 1872 | WP_194943300.1 | hypothetical protein | - |
GII79_RS11320 | 2209717..2210934 | - | 1218 | WP_153912270.1 | hypothetical protein | - |
GII79_RS11325 | 2211022..2211180 | - | 159 | Protein_2177 | hypothetical protein | - |
GII79_RS11330 | 2211225..2211476 | - | 252 | WP_134853524.1 | hypothetical protein | - |
GII79_RS11335 | 2211495..2211671 | - | 177 | WP_017696861.1 | hypothetical protein | Toxin |
- | 2211612..2211712 | + | 101 | NuclAT_0 | - | Antitoxin |
- | 2211612..2211712 | + | 101 | NuclAT_0 | - | Antitoxin |
- | 2211612..2211712 | + | 101 | NuclAT_0 | - | Antitoxin |
- | 2211612..2211712 | + | 101 | NuclAT_0 | - | Antitoxin |
GII79_RS11340 | 2212569..2213069 | - | 501 | WP_153912271.1 | hypothetical protein | - |
GII79_RS11345 | 2213445..2213624 | + | 180 | WP_153912273.1 | hypothetical protein | - |
GII79_RS11350 | 2213669..2216194 | + | 2526 | WP_153912275.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2136639..2298332 | 161693 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6878.45 Da Isoelectric Point: 12.8833
>T142713 WP_017696861.1 NZ_CP045823:c2211671-2211495 [Bacillus subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T142713 NZ_CP060842:5443-5958 [Salmonella enterica]
ATGAAATTTTACACTATATCAAGCAGATACATTGAATACCTAAAGGGATTCGAAGACAAAGTTCCCAATAGCGAAGATCC
TAACTATCAGAATCCGAAAGCTTTCATTGGCATTGTGTTAGAGATTCAAGGGCATAAGTATCTAGCCCCTTTAACATCCC
CAAAGCCATGGCATAGCACTATTAAAGAATCATCGCCTAGCTTCTTTAAGCTCCATGAAAATGGTGTCCCCGAAAATCAG
CTCGGATTGATTAATCTGAAGTTCATGATTCCAATCATCGAAGCCGAAGTATCCTTACTTGACTTGAACGGTATGCCGAA
TACCGCCTACAAGAGAATGCTCTATAAGCAGCTCCAGTTTATTCGTGTAAATTCAGACAAAATAGCTGAGAAATCAGAGC
TTTTAAGGAAGCTCGTCCTGCAAGGAAAAATGCAAGGAACATGTAATTTTTCCCTGTTAGAAGAAAAATACCGAGATTTC
GGCAAAGAAGCTAATGACACGGAAGAAGGCGAGTAA
ATGAAATTTTACACTATATCAAGCAGATACATTGAATACCTAAAGGGATTCGAAGACAAAGTTCCCAATAGCGAAGATCC
TAACTATCAGAATCCGAAAGCTTTCATTGGCATTGTGTTAGAGATTCAAGGGCATAAGTATCTAGCCCCTTTAACATCCC
CAAAGCCATGGCATAGCACTATTAAAGAATCATCGCCTAGCTTCTTTAAGCTCCATGAAAATGGTGTCCCCGAAAATCAG
CTCGGATTGATTAATCTGAAGTTCATGATTCCAATCATCGAAGCCGAAGTATCCTTACTTGACTTGAACGGTATGCCGAA
TACCGCCTACAAGAGAATGCTCTATAAGCAGCTCCAGTTTATTCGTGTAAATTCAGACAAAATAGCTGAGAAATCAGAGC
TTTTAAGGAAGCTCGTCCTGCAAGGAAAAATGCAAGGAACATGTAATTTTTCCCTGTTAGAAGAAAAATACCGAGATTTC
GGCAAAGAAGCTAATGACACGGAAGAAGGCGAGTAA
Antitoxin
Download Length: 101 bp
>AT142713 NZ_CP045823:2211612-2211712 [Bacillus subtilis]
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACACAATT
GATTGTAAGAACCGTTAAAGATATGAGGAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACACAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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