Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | bsrE-as-bsrE/- |
Location | 2069405..2069720 | Replicon | chromosome |
Accession | NZ_CP045812 | ||
Organism | Bacillus subtilis strain P8_B3 |
Toxin (Protein)
Gene name | bsrE | Uniprot ID | - |
Locus tag | GII89_RS10325 | Protein ID | WP_120322743.1 |
Coordinates | 2069405..2069566 (+) | Length | 54 a.a. |
Antitoxin (RNA)
Gene name | as-bsrE | ||
Locus tag | - | ||
Coordinates | 2069547..2069720 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
GII89_RS10310 | 2064633..2064968 | + | 336 | WP_009967409.1 | hypothetical protein | - |
GII89_RS10315 | 2065015..2068620 | - | 3606 | WP_004399367.1 | membrane protein | - |
GII89_RS10320 | 2068853..2069185 | - | 333 | WP_026009814.1 | hypothetical protein | - |
GII89_RS10325 | 2069405..2069566 | + | 162 | WP_120322743.1 | putative holin-like toxin | Toxin |
- | 2069547..2069720 | - | 174 | - | - | Antitoxin |
GII89_RS10330 | 2069835..2070677 | - | 843 | WP_003231327.1 | hypothetical protein | - |
GII89_RS10335 | 2070877..2071335 | - | 459 | WP_003231326.1 | type II toxin-antitoxin system antitoxin YobK | - |
GII89_RS10340 | 2071345..2073147 | - | 1803 | WP_004399481.1 | type II toxin-antitoxin system toxin ribonuclease YobL | - |
GII89_RS10345 | 2073249..2073806 | - | 558 | WP_004399321.1 | SMI1/KNR4 family protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2055459..2081338 | 25879 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 54 a.a. Molecular weight: 5780.74 Da Isoelectric Point: 4.6641
>T142631 WP_120322743.1 NZ_CP045812:2069405-2069566 [Bacillus subtilis]
ISCTVSFAHSRESCSSPNERGDAMSTFQALMLMLAIGSFIIALLTYIEKIDLP
ISCTVSFAHSRESCSSPNERGDAMSTFQALMLMLAIGSFIIALLTYIEKIDLP
Download Length: 162 bp
>T142631 NZ_CP060796:c2509937-2509836 [Enterococcus faecalis]
TTGTCAATCGAAGCGGCATTGGAATTGATGATTAGTTTTGCAACCCTTGTTGCGTTACTGATTTTCGGTATCCTTGAAGC
AACGAAAAACAATAAAAAATAA
TTGTCAATCGAAGCGGCATTGGAATTGATGATTAGTTTTGCAACCCTTGTTGCGTTACTGATTTTCGGTATCCTTGAAGC
AACGAAAAACAATAAAAAATAA
Antitoxin
Download Length: 174 bp
>AT142631 NZ_CP045812:c2069720-2069547 [Bacillus subtilis]
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
TTACAATACATTACAGTGCATTTCTTTAATGAGAAATGCATAAAATAAAAAAGACCGAGGTGCTACCAACACCCCGGCTC
TGTACAAAAAGTTGCCCATCAAAGGGCTTGCTCGATGTGGTTCTAGGTAGGCCTATCCCTTCAGGTTCTGAGGCTCAAGG
GAGGTCTATTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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