Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | SprA2-SprA2AS/- |
| Location | 1920835..1921019 | Replicon | chromosome |
| Accession | NZ_CP045472 | ||
| Organism | Staphylococcus aureus strain ZY05 | ||
Toxin (Protein)
| Gene name | SprA2 | Uniprot ID | A0A2P7CQJ7 |
| Locus tag | GAY69_RS09125 | Protein ID | WP_000482647.1 |
| Coordinates | 1920835..1920942 (+) | Length | 36 a.a. |
Antitoxin (RNA)
| Gene name | SprA2AS | ||
| Locus tag | - | ||
| Coordinates | 1920959..1921019 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GAY69_RS09100 | 1916197..1916670 | + | 474 | WP_000456483.1 | GyrI-like domain-containing protein | - |
| GAY69_RS09105 | 1916793..1918004 | - | 1212 | WP_001191921.1 | multidrug effflux MFS transporter | - |
| GAY69_RS09110 | 1918187..1918846 | - | 660 | WP_000831298.1 | membrane protein | - |
| GAY69_RS09115 | 1918906..1920048 | - | 1143 | WP_001176863.1 | glycerate kinase | - |
| GAY69_RS09120 | 1920316..1920702 | + | 387 | WP_000779353.1 | flippase GtxA | - |
| GAY69_RS09125 | 1920835..1920942 | + | 108 | WP_000482647.1 | type I toxin-antitoxin system Fst family toxin | Toxin |
| - | 1920959..1921019 | - | 61 | - | - | Antitoxin |
| GAY69_RS09130 | 1920969..1921136 | + | 168 | WP_000301893.1 | hypothetical protein | - |
| GAY69_RS09135 | 1921590..1923302 | + | 1713 | WP_001064821.1 | ABC transporter ATP-binding protein/permease | - |
| GAY69_RS09140 | 1923378..1925111 | + | 1734 | WP_000488493.1 | ABC transporter ATP-binding protein/permease | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | flank | IS/Tn | - | - | 1925458..1927104 | 1646 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 36 a.a. Molecular weight: 4012.76 Da Isoelectric Point: 10.4935
>T141909 WP_000482647.1 NZ_CP045472:1920835-1920942 [Staphylococcus aureus]
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
MFNLLIDIMTSALSGCLVAFFAHWLRTRNNKKGDK
Download Length: 108 bp
>T141909 NZ_CP060193:c3623179-3622829 [Bacillus sp. PAMC26543]
TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGGGTGCGCCCGGT
TTTAGTGATCCAAAATGACATCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCTT
ACAGATCAGTTTGGCACTCATTGATTTTTAG
TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGGGTGCGCCCGGT
TTTAGTGATCCAAAATGACATCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCCCAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATTGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCTT
ACAGATCAGTTTGGCACTCATTGATTTTTAG
Antitoxin
Download Length: 61 bp
>AT141909 NZ_CP045472:c1921019-1920959 [Staphylococcus aureus]
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
TACATAATAAATTGAACATCTAAATACACCAAATCCCCTCACTACTGCCATAGTGAGGGGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|