Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
Location | 741179..741954 | Replicon | chromosome |
Accession | NZ_CP045263 | ||
Organism | Klebsiella pneumoniae strain 16HN-263 |
Toxin (Protein)
Gene name | TacT2 | Uniprot ID | A0A1Q4Q548 |
Locus tag | ELO34_RS03760 | Protein ID | WP_004150910.1 |
Coordinates | 741469..741954 (+) | Length | 162 a.a. |
Antitoxin (Protein)
Gene name | TacA2 | Uniprot ID | W8UEW1 |
Locus tag | ELO34_RS03755 | Protein ID | WP_004150912.1 |
Coordinates | 741179..741472 (+) | Length | 98 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
ELO34_RS03735 | 736387..736989 | - | 603 | WP_062954968.1 | short chain dehydrogenase | - |
ELO34_RS03740 | 737087..737998 | + | 912 | WP_004188550.1 | LysR family transcriptional regulator | - |
ELO34_RS03745 | 737999..739147 | - | 1149 | WP_004150915.1 | PLP-dependent aspartate aminotransferase family protein | - |
ELO34_RS03750 | 739158..740534 | - | 1377 | WP_004217775.1 | cystathionine beta-synthase | - |
ELO34_RS03755 | 741179..741472 | + | 294 | WP_004150912.1 | DUF1778 domain-containing protein | Antitoxin |
ELO34_RS03760 | 741469..741954 | + | 486 | WP_004150910.1 | GNAT family N-acetyltransferase | Toxin |
ELO34_RS03765 | 742658..743251 | + | 594 | WP_004188553.1 | hypothetical protein | - |
ELO34_RS03770 | 743348..743564 | + | 217 | Protein_729 | transposase | - |
ELO34_RS03775 | 744170..745042 | + | 873 | WP_004188557.1 | ParA family protein | - |
ELO34_RS03780 | 745042..745425 | + | 384 | WP_004150906.1 | hypothetical protein | - |
ELO34_RS03785 | 745418..746785 | + | 1368 | WP_004150905.1 | replicative DNA helicase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
flank | IS/Tn | - | - | 743348..743500 | 152 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 162 a.a. Molecular weight: 17551.59 Da Isoelectric Point: 8.8818
>T141582 WP_004150910.1 NZ_CP045263:741469-741954 [Klebsiella pneumoniae]
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A
Download Length: 486 bp
>T141582 NZ_CP060018:3142400-3142732 [Mycolicibacterium holsaticum DSM 44478 = JCM 12374]
GTGAACCGAGGAGAGATCTGGACCGTAGCGGGGGGTGTCTACTCGACAAAACCGCGTCCCGCGGTGATCGTCCAGGATGA
TTTGTTCGATGCCACGATGTCGGTGGCGGTTGCGCCGATCACCAGCGCATTACTGGAGGCTCCGCTAATGCGCATTCGGA
TAGCCGGCGGAGACGGACGGTTATCCGGACTCGACCACGACAGTGACGTGATGATCGACAAGCTCACAACTGTCAGGAGG
TCGAACGTCCACGCGCGAGTCGGTCGGCTGACTGCGGAACAAGTCGTCGAAGTCGAGCGAGCCATGATGGCATTTCTCGG
GCTTGCGCGGTAA
GTGAACCGAGGAGAGATCTGGACCGTAGCGGGGGGTGTCTACTCGACAAAACCGCGTCCCGCGGTGATCGTCCAGGATGA
TTTGTTCGATGCCACGATGTCGGTGGCGGTTGCGCCGATCACCAGCGCATTACTGGAGGCTCCGCTAATGCGCATTCGGA
TAGCCGGCGGAGACGGACGGTTATCCGGACTCGACCACGACAGTGACGTGATGATCGACAAGCTCACAACTGTCAGGAGG
TCGAACGTCCACGCGCGAGTCGGTCGGCTGACTGCGGAACAAGTCGTCGAAGTCGAGCGAGCCATGATGGCATTTCTCGG
GCTTGCGCGGTAA
Antitoxin
Download Length: 98 a.a. Molecular weight: 10901.46 Da Isoelectric Point: 6.3783
>AT141582 WP_004150912.1 NZ_CP045263:741179-741472 [Klebsiella pneumoniae]
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE
Download Length: 294 bp
>AT141582 NZ_CP060018:3142197-3142403 [Mycolicibacterium holsaticum DSM 44478 = JCM 12374]
ATGGCGGTGAGAGACAGGGTCGGCGAGTACCGCCGGCGCATGCGGGAGCGCGGCCTGCGCCCACTGCAAGTCTGGGTGCC
TGACGTGCGCACCGAGAGTTTTGCCGCCGAGGCTCATCGTCAATCGTCACTGGTGGCGCGGGCGGATGTAAACAGCGATG
ATCAGGACTTCATCGAAGCTGTCTCGACGCCATGGGACGAGGAGTGA
ATGGCGGTGAGAGACAGGGTCGGCGAGTACCGCCGGCGCATGCGGGAGCGCGGCCTGCGCCCACTGCAAGTCTGGGTGCC
TGACGTGCGCACCGAGAGTTTTGCCGCCGAGGCTCATCGTCAATCGTCACTGGTGGCGCGGGCGGATGTAAACAGCGATG
ATCAGGACTTCATCGAAGCTGTCTCGACGCCATGGGACGAGGAGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Structures
Toxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A1Q4Q548 |
Antitoxin
Source | ID | Structure |
---|---|---|
AlphaFold DB | A0A0H3GVL4 |