Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 731721..732414 Replicon chromosome
Accession NZ_CP040090
Organism Escherichia coli strain FT130

Toxin (Protein)


Gene name mqsR Uniprot ID S1EZG2
Locus tag FC325_RS03510 Protein ID WP_000415584.1
Coordinates 731721..732017 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID S1EBV2
Locus tag FC325_RS03515 Protein ID WP_000650107.1
Coordinates 732019..732414 (+) Length 132 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FC325_RS03475 726809..727123 - 315 WP_000958598.1 antibiotic biosynthesis monooxygenase -
FC325_RS03480 727154..727735 - 582 WP_000065430.1 NADPH:quinone oxidoreductase MdaB -
FC325_RS03485 728054..728386 + 333 WP_000917684.1 DUF2645 family protein -
FC325_RS03490 728432..729781 - 1350 WP_000673402.1 two-component system sensor histidine kinase QseC -
FC325_RS03495 729778..730437 - 660 WP_001221493.1 two-component system response regulator QseB -
FC325_RS03500 730589..730981 + 393 WP_000712658.1 OB fold stress tolerance protein YgiW -
FC325_RS03505 731034..731516 + 483 WP_000183505.1 transcriptional regulator -
FC325_RS03510 731721..732017 + 297 WP_000415584.1 type II toxin-antitoxin system toxin MqsR Toxin
FC325_RS03515 732019..732414 + 396 WP_000650107.1 type II toxin-antitoxin system antitoxin MqsA Antitoxin
FC325_RS03520 732548..734155 + 1608 WP_178969889.1 ABC transporter substrate-binding protein -
FC325_RS03525 734293..736551 + 2259 WP_001281881.1 DNA topoisomerase IV subunit A -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Zinc finger, MqsA-type

(3-47)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11231.96 Da        Isoelectric Point: 8.9070

>T124902 WP_000415584.1 NZ_CP040090:731721-732017 [Escherichia coli]
MEKRTPHTRLSQVKKLVNAGQVRTTRSALLNADELGLDFDGMCNVIIGLSESDFYKSMTTYSDHTIWQDVYRPRLVTGQV
YLKITVIHDVLIVSFKEK

Download         Length: 297 bp

>T124902 NZ_CP040090:731721-732017 [Escherichia coli]
ATGGAAAAACGCACACCACATACACGTTTGAGTCAGGTTAAAAAACTTGTCAATGCCGGGCAAGTTCGTACAACACGTAG
TGCACTGTTAAATGCAGATGAGTTAGGTTTGGATTTTGATGGTATGTGTAATGTTATCATTGGATTATCAGAGAGCGACT
TTTATAAAAGCATGACCACCTACTCTGATCATACTATCTGGCAGGATGTTTACAGACCCAGGCTTGTTACAGGCCAGGTT
TATCTTAAAATTACGGTAATTCATGACGTACTGATCGTCTCGTTTAAGGAGAAGTAA

Antitoxin


Download         Length: 132 a.a.        Molecular weight: 14703.10 Da        Isoelectric Point: 9.2136

>AT124902 WP_000650107.1 NZ_CP040090:732019-732414 [Escherichia coli]
MKCPVCHQGEMVSGIKDIPYTFRGRKTVLKGIHGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKK
LSLTQKEASEIFGGGVNAFSRYEKGNAQPHPSTIKLLRVLDKHPELLNEIR

Download         Length: 396 bp

>AT124902 NZ_CP040090:732019-732414 [Escherichia coli]
ATGAAATGTCCGGTTTGCCACCAGGGAGAAATGGTTTCTGGCATTAAAGATATTCCATACACCTTCCGTGGACGAAAAAC
AGTATTGAAAGGTATCCACGGTTTATATTGTGTCCATTGCGAAGAGAGCATCATGAATAAAGAAGAGTCAGATGCTTTCA
TGGCGCAAGTAAAGGCATTTCGGGCTTCGGTGAATGCCGAAACAGTGGCACCTGAATTTATAGTGAAGGTTCGAAAAAAG
CTCTCTCTTACCCAAAAAGAGGCAAGCGAAATTTTTGGGGGAGGTGTAAATGCGTTTTCGCGTTACGAAAAAGGCAATGC
CCAACCTCATCCTTCCACAATCAAACTTTTACGTGTTCTGGATAAGCATCCAGAACTATTGAATGAAATCCGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 3HI2

Antitoxin

Source ID Structure
PDB 3HI2
PDB 3GA8
PDB 3O9X
PDB 2KZ8
PDB 3FMY
PDB 3GN5
AlphaFold DB A0A7U9LU65

References