Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) yefM-yoeB (relBE)/YoeB-YefM
Location 763248..763766 Replicon chromosome
Accession NZ_CP040020
Organism Brevibacterium sp. CS2

Toxin (Protein)


Gene name yoeB Uniprot ID -
Locus tag FDF13_RS03310 Protein ID WP_101652830.1
Coordinates 763248..763505 (-) Length 86 a.a.

Antitoxin (Protein)


Gene name yefM Uniprot ID -
Locus tag FDF13_RS03315 Protein ID WP_137318439.1
Coordinates 763509..763766 (-) Length 86 a.a.

Genomic Context


FDF13_RS03300FDF13_RS03305FDF13_RS03335FDF13_RS03295FDF13_RS03310FDF13_RS03315FDF13_RS03320FDF13_RS03325FDF13_RS03330
Location: 761331..762113 (783 bp)
Type: Others
Protein ID: WP_137318437.1
Location: 762115..763185 (1071 bp)
Type: Others
Protein ID: WP_137318438.1
Location: 767457..768677 (1221 bp)
Type: Others
Protein ID: WP_175406844.1
Location: 759725..760975 (1251 bp)
Type: Others
Protein ID: WP_137318436.1
Location: 763248..763505 (258 bp)
Type: Toxin
Protein ID: WP_101652830.1
Location: 763509..763766 (258 bp)
Type: Antitoxin
Protein ID: WP_137318439.1
Location: 763824..765008 (1185 bp)
Type: Others
Protein ID: WP_175406843.1
Location: 765028..766254 (1227 bp)
Type: Others
Protein ID: WP_137318441.1
Location: 766383..767315 (933 bp)
Type: Others
Protein ID: WP_175407016.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
FDF13_RS03295759725..760975-1251WP_137318436.1glutaminase-
FDF13_RS03300761331..762113+783WP_137318437.1SDR family oxidoreductase-
FDF13_RS03305762115..763185+1071WP_137318438.1hypothetical protein-
FDF13_RS03310763248..763505-258WP_101652830.1Txe/YoeB family addiction module toxinToxin
FDF13_RS03315763509..763766-258WP_137318439.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
FDF13_RS03320763824..765008-1185WP_175406843.1glycosyltransferase-
FDF13_RS03325765028..766254-1227WP_137318441.1hypothetical protein-
FDF13_RS03330766383..767315-933WP_175407016.1hypothetical protein-
FDF13_RS03335767457..768677+1221WP_175406844.1glycosyltransferase family 1 protein-

Associated MGEs


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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(5-84)

Antitoxin

(1-73)


Sequences


Toxin        


Download         Length: 86 a.a.        Molecular weight: 10356.83 Da        Isoelectric Point: 8.8720

>T124754 WP_101652830.1 NZ_CP040020:c763505-763248 [Brevibacterium sp. CS2]
MLLVWDEGAWEDYLWWQAQDRKVLKRINRLIKEIERNGNEGIGKPEPLKHDFAGYWSRRITDEHRLVYKLARDEIRIAAC
RYHYG

Download         Length: 258 bp

>T124754 NZ_CP040020:c763505-763248 [Brevibacterium sp. CS2]
ATGCTTCTGGTGTGGGATGAAGGTGCATGGGAGGACTACCTGTGGTGGCAGGCACAGGACCGAAAGGTACTCAAACGCAT
CAATCGCCTGATCAAGGAGATCGAGCGCAACGGCAACGAGGGGATCGGTAAACCGGAACCCCTCAAACACGATTTCGCAG
GATACTGGTCCCGGCGCATCACCGATGAGCATCGACTCGTCTACAAACTCGCTCGCGATGAGATCCGCATCGCAGCCTGT
CGATATCACTACGGATAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9626.79 Da        Isoelectric Point: 4.6533

>AT124754 WP_137318439.1 NZ_CP040020:c763766-763509 [Brevibacterium sp. CS2]
MKTMSYTDSRANYAKVLDDVTNDREAVVITRAGHEPVVIVSLADYESLRETAYLMRSPANARRLLDAMERLEADRGQAHE
LIETD

Download         Length: 258 bp

>AT124754 NZ_CP040020:c763766-763509 [Brevibacterium sp. CS2]
ATGAAGACGATGAGCTACACAGATTCACGGGCCAATTATGCGAAAGTGCTCGACGATGTCACCAATGATCGGGAGGCGGT
CGTCATCACGCGCGCCGGCCATGAGCCGGTCGTCATTGTTTCCTTGGCGGATTACGAATCGCTTCGCGAAACCGCCTATC
TCATGCGATCGCCGGCCAACGCCCGTCGACTGCTGGATGCAATGGAACGACTTGAAGCCGATCGCGGGCAGGCGCACGAA
CTCATCGAGACCGACTGA

Similar Proteins


Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures


Toxin

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Source
ID
Structure
No matching records found


Antitoxin

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Source
ID
Structure
No matching records found

References