Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-YefM |
Location | 763248..763766 | Replicon | chromosome |
Accession | NZ_CP040020 | ||
Organism | Brevibacterium sp. CS2 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | - |
Locus tag | FDF13_RS03310 | Protein ID | WP_101652830.1 |
Coordinates | 763248..763505 (-) | Length | 86 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | - |
Locus tag | FDF13_RS03315 | Protein ID | WP_137318439.1 |
Coordinates | 763509..763766 (-) | Length | 86 a.a. |
Genomic Context
Location: 761331..762113 (783 bp)
Type: Others
Protein ID: WP_137318437.1
Type: Others
Protein ID: WP_137318437.1
Location: 762115..763185 (1071 bp)
Type: Others
Protein ID: WP_137318438.1
Type: Others
Protein ID: WP_137318438.1
Location: 767457..768677 (1221 bp)
Type: Others
Protein ID: WP_175406844.1
Type: Others
Protein ID: WP_175406844.1
Location: 759725..760975 (1251 bp)
Type: Others
Protein ID: WP_137318436.1
Type: Others
Protein ID: WP_137318436.1
Location: 763248..763505 (258 bp)
Type: Toxin
Protein ID: WP_101652830.1
Type: Toxin
Protein ID: WP_101652830.1
Location: 763509..763766 (258 bp)
Type: Antitoxin
Protein ID: WP_137318439.1
Type: Antitoxin
Protein ID: WP_137318439.1
Location: 763824..765008 (1185 bp)
Type: Others
Protein ID: WP_175406843.1
Type: Others
Protein ID: WP_175406843.1
Location: 765028..766254 (1227 bp)
Type: Others
Protein ID: WP_137318441.1
Type: Others
Protein ID: WP_137318441.1
Location: 766383..767315 (933 bp)
Type: Others
Protein ID: WP_175407016.1
Type: Others
Protein ID: WP_175407016.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FDF13_RS03295 | 759725..760975 | - | 1251 | WP_137318436.1 | glutaminase | - |
FDF13_RS03300 | 761331..762113 | + | 783 | WP_137318437.1 | SDR family oxidoreductase | - |
FDF13_RS03305 | 762115..763185 | + | 1071 | WP_137318438.1 | hypothetical protein | - |
FDF13_RS03310 | 763248..763505 | - | 258 | WP_101652830.1 | Txe/YoeB family addiction module toxin | Toxin |
FDF13_RS03315 | 763509..763766 | - | 258 | WP_137318439.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
FDF13_RS03320 | 763824..765008 | - | 1185 | WP_175406843.1 | glycosyltransferase | - |
FDF13_RS03325 | 765028..766254 | - | 1227 | WP_137318441.1 | hypothetical protein | - |
FDF13_RS03330 | 766383..767315 | - | 933 | WP_175407016.1 | hypothetical protein | - |
FDF13_RS03335 | 767457..768677 | + | 1221 | WP_175406844.1 | glycosyltransferase family 1 protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
No matching records found |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 86 a.a. Molecular weight: 10356.83 Da Isoelectric Point: 8.8720
>T124754 WP_101652830.1 NZ_CP040020:c763505-763248 [Brevibacterium sp. CS2]
MLLVWDEGAWEDYLWWQAQDRKVLKRINRLIKEIERNGNEGIGKPEPLKHDFAGYWSRRITDEHRLVYKLARDEIRIAAC
RYHYG
MLLVWDEGAWEDYLWWQAQDRKVLKRINRLIKEIERNGNEGIGKPEPLKHDFAGYWSRRITDEHRLVYKLARDEIRIAAC
RYHYG
Download Length: 258 bp
>T124754 NZ_CP040020:c763505-763248 [Brevibacterium sp. CS2]
ATGCTTCTGGTGTGGGATGAAGGTGCATGGGAGGACTACCTGTGGTGGCAGGCACAGGACCGAAAGGTACTCAAACGCAT
CAATCGCCTGATCAAGGAGATCGAGCGCAACGGCAACGAGGGGATCGGTAAACCGGAACCCCTCAAACACGATTTCGCAG
GATACTGGTCCCGGCGCATCACCGATGAGCATCGACTCGTCTACAAACTCGCTCGCGATGAGATCCGCATCGCAGCCTGT
CGATATCACTACGGATAA
ATGCTTCTGGTGTGGGATGAAGGTGCATGGGAGGACTACCTGTGGTGGCAGGCACAGGACCGAAAGGTACTCAAACGCAT
CAATCGCCTGATCAAGGAGATCGAGCGCAACGGCAACGAGGGGATCGGTAAACCGGAACCCCTCAAACACGATTTCGCAG
GATACTGGTCCCGGCGCATCACCGATGAGCATCGACTCGTCTACAAACTCGCTCGCGATGAGATCCGCATCGCAGCCTGT
CGATATCACTACGGATAA
Antitoxin
Download Length: 86 a.a. Molecular weight: 9626.79 Da Isoelectric Point: 4.6533
>AT124754 WP_137318439.1 NZ_CP040020:c763766-763509 [Brevibacterium sp. CS2]
MKTMSYTDSRANYAKVLDDVTNDREAVVITRAGHEPVVIVSLADYESLRETAYLMRSPANARRLLDAMERLEADRGQAHE
LIETD
MKTMSYTDSRANYAKVLDDVTNDREAVVITRAGHEPVVIVSLADYESLRETAYLMRSPANARRLLDAMERLEADRGQAHE
LIETD
Download Length: 258 bp
>AT124754 NZ_CP040020:c763766-763509 [Brevibacterium sp. CS2]
ATGAAGACGATGAGCTACACAGATTCACGGGCCAATTATGCGAAAGTGCTCGACGATGTCACCAATGATCGGGAGGCGGT
CGTCATCACGCGCGCCGGCCATGAGCCGGTCGTCATTGTTTCCTTGGCGGATTACGAATCGCTTCGCGAAACCGCCTATC
TCATGCGATCGCCGGCCAACGCCCGTCGACTGCTGGATGCAATGGAACGACTTGAAGCCGATCGCGGGCAGGCGCACGAA
CTCATCGAGACCGACTGA
ATGAAGACGATGAGCTACACAGATTCACGGGCCAATTATGCGAAAGTGCTCGACGATGTCACCAATGATCGGGAGGCGGT
CGTCATCACGCGCGCCGGCCATGAGCCGGTCGTCATTGTTTCCTTGGCGGATTACGAATCGCTTCGCGAAACCGCCTATC
TCATGCGATCGCCGGCCAACGCCCGTCGACTGCTGGATGCAATGGAACGACTTGAAGCCGATCGCGGGCAGGCGCACGAA
CTCATCGAGACCGACTGA