Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | yefM-yoeB (relBE)/YoeB-RelB |
Location | 545267..545786 | Replicon | chromosome |
Accession | NZ_CP040007 | ||
Organism | Arachnia propionica strain F0700 |
Toxin (Protein)
Gene name | yoeB | Uniprot ID | A0A3N4CWJ0 |
Locus tag | FBF34_RS02470 | Protein ID | WP_014845635.1 |
Coordinates | 545267..545527 (-) | Length | 87 a.a. |
Antitoxin (Protein)
Gene name | yefM | Uniprot ID | - |
Locus tag | FBF34_RS02475 | Protein ID | WP_014845636.1 |
Coordinates | 545529..545786 (-) | Length | 86 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
FBF34_RS02450 | 540994..541872 | + | 879 | WP_014845630.1 | neutral zinc metallopeptidase | - |
FBF34_RS02455 | 541943..543106 | + | 1164 | WP_198341740.1 | 4-hydroxybutyrate CoA-transferase | - |
FBF34_RS02460 | 543321..544304 | - | 984 | WP_123823886.1 | hypothetical protein | - |
FBF34_RS02465 | 544400..545053 | - | 654 | WP_014845634.1 | peptide-methionine (S)-S-oxide reductase MsrA | - |
FBF34_RS02470 | 545267..545527 | - | 261 | WP_014845635.1 | Txe/YoeB family addiction module toxin | Toxin |
FBF34_RS02475 | 545529..545786 | - | 258 | WP_014845636.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
FBF34_RS02480 | 546139..548070 | + | 1932 | WP_041696138.1 | serine hydrolase | - |
FBF34_RS02485 | 548137..549180 | + | 1044 | WP_051014908.1 | alpha/beta hydrolase | - |
FBF34_RS02490 | 549177..550334 | + | 1158 | WP_014845639.1 | two-component sensor histidine kinase | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 87 a.a. Molecular weight: 10590.93 Da Isoelectric Point: 8.4729
>T124743 WP_014845635.1 NZ_CP040007:c545527-545267 [Arachnia propionica]
MRICWADEAWEDYLWWQTQDRRTLKRINSLIRDIARNGNEELGKPEALRYQLSGYWSRRITEEHRLVYRITDTEVQIAAC
RYHYGR
MRICWADEAWEDYLWWQTQDRRTLKRINSLIRDIARNGNEELGKPEALRYQLSGYWSRRITEEHRLVYRITDTEVQIAAC
RYHYGR
Download Length: 261 bp
>T124743 NZ_CP040007:c545527-545267 [Arachnia propionica]
ATGCGGATCTGCTGGGCCGACGAAGCGTGGGAGGACTACCTCTGGTGGCAAACCCAGGACCGCCGGACCCTCAAGAGAAT
CAACTCCCTGATCCGGGACATCGCTCGCAACGGAAACGAGGAACTGGGCAAACCGGAGGCGCTGCGATACCAACTCTCCG
GCTACTGGTCCCGGCGTATCACTGAGGAGCATCGGCTGGTCTACCGAATCACCGACACCGAGGTCCAGATTGCCGCATGC
CGGTACCACTATGGCCGCTGA
ATGCGGATCTGCTGGGCCGACGAAGCGTGGGAGGACTACCTCTGGTGGCAAACCCAGGACCGCCGGACCCTCAAGAGAAT
CAACTCCCTGATCCGGGACATCGCTCGCAACGGAAACGAGGAACTGGGCAAACCGGAGGCGCTGCGATACCAACTCTCCG
GCTACTGGTCCCGGCGTATCACTGAGGAGCATCGGCTGGTCTACCGAATCACCGACACCGAGGTCCAGATTGCCGCATGC
CGGTACCACTATGGCCGCTGA
Antitoxin
Download Length: 86 a.a. Molecular weight: 9609.68 Da Isoelectric Point: 4.4777
>AT124743 WP_014845636.1 NZ_CP040007:c545786-545529 [Arachnia propionica]
VKTMSYTESRANYAAVLDEVVNNREEIVITRAGHEPVVIVSLEEYQSLRETAYLLRSPANAQRLASAMEQLDRNDGIPHD
LLDDH
VKTMSYTESRANYAAVLDEVVNNREEIVITRAGHEPVVIVSLEEYQSLRETAYLLRSPANAQRLASAMEQLDRNDGIPHD
LLDDH
Download Length: 258 bp
>AT124743 NZ_CP040007:c545786-545529 [Arachnia propionica]
GTGAAGACCATGTCGTACACCGAGTCCCGAGCCAACTACGCGGCGGTCCTCGACGAGGTCGTGAACAATCGCGAGGAGAT
CGTCATCACCCGGGCAGGACACGAACCCGTCGTGATCGTCTCCCTGGAGGAGTACCAGTCCCTTCGCGAGACCGCCTACC
TGTTGCGTTCGCCCGCCAACGCCCAGCGGCTGGCCAGCGCCATGGAACAGCTCGACAGGAACGACGGCATCCCGCACGAC
CTCCTCGACGACCACTGA
GTGAAGACCATGTCGTACACCGAGTCCCGAGCCAACTACGCGGCGGTCCTCGACGAGGTCGTGAACAATCGCGAGGAGAT
CGTCATCACCCGGGCAGGACACGAACCCGTCGTGATCGTCTCCCTGGAGGAGTACCAGTCCCTTCGCGAGACCGCCTACC
TGTTGCGTTCGCCCGCCAACGCCCAGCGGCTGGCCAGCGCCATGGAACAGCTCGACAGGAACGACGGCATCCCGCACGAC
CTCCTCGACGACCACTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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