Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 2175184..2175883 Replicon chromosome
Accession NZ_CP039691
Organism Agrobacterium larrymoorei strain CFBP5473

Toxin (Protein)


Gene name mqsR Uniprot ID A0A4D7DRI6
Locus tag CFBP5473_RS10480 Protein ID WP_027675444.1
Coordinates 2175184..2175480 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID A0A4D7DPV9
Locus tag CFBP5473_RS10485 Protein ID WP_027675445.1
Coordinates 2175482..2175883 (+) Length 134 a.a.

Genomic Context

CFBP5473_RS10450CFBP5473_RS10455CFBP5473_RS10475CFBP5473_RS10480CFBP5473_RS10485CFBP5473_RS10505CFBP5473_RS10460CFBP5473_RS10465CFBP5473_RS10470CFBP5473_RS10490CFBP5473_RS10495CFBP5473_RS10500
Location: 2170460..2170789 (330 bp)
Type: Others
Protein ID: WP_037170972.1
Location: 2170786..2171067 (282 bp)
Type: Others
Protein ID: WP_027675439.1
Location: 2174062..2175078 (1017 bp)
Type: Others
Protein ID: WP_027675443.1
Location: 2175184..2175480 (297 bp)
Type: Toxin
Protein ID: WP_027675444.1
Location: 2175482..2175883 (402 bp)
Type: Antitoxin
Protein ID: WP_027675445.1
Location: 2179393..2180787 (1395 bp)
Type: Others
Protein ID: WP_027675449.1
Location: 2171167..2172003 (837 bp)
Type: Others
Protein ID: WP_027675440.1
Location: 2172132..2173529 (1398 bp)
Type: Others
Protein ID: WP_027675441.1
Location: 2173526..2173924 (399 bp)
Type: Others
Protein ID: WP_027675442.1
Location: 2175981..2176727 (747 bp)
Type: Others
Protein ID: WP_027675446.1
Location: 2176883..2177386 (504 bp)
Type: Others
Protein ID: WP_051441274.1
Location: 2177418..2179082 (1665 bp)
Type: Others
Protein ID: WP_027675448.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CFBP5473_RS104502170460..2170789+330WP_037170972.1type II toxin-antitoxin system RelE/ParE family toxin-
CFBP5473_RS104552170786..2171067+282WP_027675439.1helix-turn-helix domain-containing protein-
CFBP5473_RS104602171167..2172003-837WP_027675440.1undecaprenyl-diphosphate phosphatase-
CFBP5473_RS104652172132..2173529-1398WP_027675441.1coniferyl aldehyde dehydrogenase-
CFBP5473_RS104702173526..2173924-399WP_027675442.1helix-turn-helix transcriptional regulator-
CFBP5473_RS104752174062..2175078+1017WP_027675443.1zinc-binding alcohol dehydrogenase family protein-
CFBP5473_RS104802175184..2175480+297WP_027675444.1type II toxin-antitoxin system MqsR family toxinToxin
CFBP5473_RS104852175482..2175883+402WP_027675445.1type II toxin-antitoxin system MqsA family antitoxinAntitoxin
CFBP5473_RS104902175981..2176727-747WP_027675446.1pentapeptide repeat-containing protein-
CFBP5473_RS104952176883..2177386-504WP_051441274.1GNAT family N-acetyltransferase-
CFBP5473_RS105002177418..2179082-1665WP_027675448.1electron transfer flavoprotein-ubiquinone oxidoreductase-
CFBP5473_RS105052179393..2180787+1395WP_027675449.1FAD-binding oxidoreductase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(2-97)

Antitoxin

Antitoxin MqsA

(3-130)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11165.86 Da        Isoelectric Point: 6.9886

>T124198 WP_027675444.1 NZ_CP039691:2175184-2175480 [Agrobacterium larrymoorei]
MEKTAPHTVLEDVWRLLDEGKVRETFSALSGAAALGMSRSDMHDVVRALSLKDFFKSMTAYHDENVWHDVYKPVTPFGHL
YVKLIVSNNVLIVSFKEK

Download         Length: 297 bp

>T124198 NZ_CP039691:2175184-2175480 [Agrobacterium larrymoorei]
ATGGAAAAGACCGCGCCGCATACTGTGCTCGAAGATGTATGGCGATTATTGGATGAAGGCAAAGTCAGGGAAACATTCTC
AGCCTTGAGCGGAGCCGCGGCTCTCGGCATGTCGCGGAGTGATATGCATGACGTCGTACGTGCCCTAAGCCTCAAGGATT
TCTTCAAATCCATGACGGCTTACCACGACGAGAATGTCTGGCATGATGTCTATAAACCGGTGACGCCCTTCGGGCATCTA
TATGTAAAACTGATCGTATCGAACAACGTATTGATCGTGTCGTTCAAGGAGAAGTAA

Antitoxin


Download         Length: 134 a.a.        Molecular weight: 14521.51 Da        Isoelectric Point: 5.2501

>AT124198 WP_027675445.1 NZ_CP039691:2175482-2175883 [Agrobacterium larrymoorei]
MACPICGADAVTKETRDLEYSYKGQVTTIPHVTGTFCSACGEAILEGEESERVSAAMLAFNRQVNASFVDPEFIATVRKK
LSLDQREAGDLFGGGVNAFSRYENGKSRPPRSLIQLLKILEKHPDLLDEIKAA

Download         Length: 402 bp

>AT124198 NZ_CP039691:2175482-2175883 [Agrobacterium larrymoorei]
ATGGCTTGCCCTATTTGCGGCGCTGATGCCGTGACGAAGGAAACGCGCGATCTTGAATATTCCTATAAAGGACAAGTCAC
GACCATTCCTCATGTAACGGGCACATTTTGCAGCGCTTGCGGCGAAGCCATACTGGAAGGCGAAGAGAGCGAACGCGTGA
GCGCCGCGATGCTCGCTTTCAACAGACAGGTCAATGCGAGCTTTGTCGACCCGGAATTTATAGCGACGGTGCGCAAAAAG
CTTTCGCTGGACCAGCGGGAAGCAGGCGATCTTTTCGGCGGTGGCGTGAACGCCTTCTCGCGTTACGAGAACGGCAAATC
ACGCCCGCCGCGCTCCCTTATTCAGTTGCTCAAGATATTGGAGAAGCACCCCGACCTGCTGGACGAAATCAAGGCTGCCT
GA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A4D7DRI6

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A4D7DPV9

References