Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) fst-RNAII/-
Location 381639..381833 Replicon chromosome
Accession NZ_CP039549
Organism Enterococcus faecalis strain VE18395

Toxin (Protein)


Gene name fst Uniprot ID -
Locus tag FAJ55_RS16950 Protein ID WP_015543884.1
Coordinates 381738..381833 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name RNAII
Locus tag -
Coordinates 381639..381703 (+)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
FAJ55_RS02150 377272..379014 + 1743 WP_002399652.1 PTS transporter subunit EIIC -
FAJ55_RS02155 379005..381038 + 2034 WP_002387671.1 transcription antiterminator -
FAJ55_RS02160 381049..381483 + 435 WP_002358391.1 PTS sugar transporter subunit IIA -
- 381639..381703 + 65 - - Antitoxin
FAJ55_RS16950 381738..381833 - 96 WP_015543884.1 type I toxin-antitoxin system Fst family toxin Toxin
FAJ55_RS02170 382079..383851 + 1773 WP_010706745.1 PTS mannitol transporter subunit IICBA -
FAJ55_RS02175 383866..384303 + 438 WP_002355279.1 PTS sugar transporter subunit IIA -
FAJ55_RS02180 384318..385472 + 1155 WP_002355280.1 mannitol-1-phosphate 5-dehydrogenase -
FAJ55_RS02185 385539..386654 - 1116 WP_002379062.1 FAD-binding oxidoreductase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Type I toxin-antitoxin system, toxin Ldr

(1-35)


Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3659.47 Da        Isoelectric Point: 4.6275

>T124131 WP_015543884.1 NZ_CP039549:c381833-381738 [Enterococcus faecalis]
MYEIVTKILVPIFVGIVLKLVTIWLEKQNEE

Download         Length: 96 bp

>T124131 NZ_CP039549:c381833-381738 [Enterococcus faecalis]
ATGTACGAGATTGTCACAAAAATTCTTGTGCCGATTTTTGTCGGGATTGTCCTGAAACTTGTAACCATTTGGTTGGAAAA
ACAGAACGAGGAATAA

Antitoxin


Download         Length: 65 bp

>AT124131 NZ_CP039549:381639-381703 [Enterococcus faecalis]
CTTGTGACAAAGTCGTGCATGGATGCACTAAAAAGACACCCTATTGTGGTAGGGTGTCTTTTTTT

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References