Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) txpA-ratA/-
Location 3139571..3139956 Replicon chromosome
Accession NZ_CP039296
Organism Enterococcus faecalis strain VE14089

Toxin (Protein)


Gene name txpA Uniprot ID A0A4U3MBY2
Locus tag E7T02_RS16650 Protein ID WP_002372618.1
Coordinates 3139571..3139768 (+) Length 66 a.a.

Antitoxin (RNA)


Gene name ratA
Locus tag -
Coordinates 3139701..3139956 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
E7T02_RS16625 3135048..3135680 - 633 WP_002358972.1 RloB family protein -
E7T02_RS16630 3135689..3136984 - 1296 WP_002379013.1 AAA family ATPase -
E7T02_RS16645 3137446..3139062 + 1617 WP_002379014.1 phosphatase PAP2/LCP family protein -
E7T02_RS16650 3139571..3139768 + 198 WP_002372618.1 putative holin-like toxin Toxin
E7T02_RS16655 3139958..3143716 - 3759 WP_010706868.1 WxL domain-containing protein -
E7T02_RS16660 3144312..3144455 + 144 WP_002387585.1 putative holin-like toxin -
- 3139336..3139512 - 177 - - -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(32-65)


Sequences


Toxin        


Download         Length: 66 a.a.        Molecular weight: 7516.13 Da        Isoelectric Point: 10.5649

>T123767 WP_002372618.1 NZ_CP039296:3139571-3139768 [Enterococcus faecalis]
MCREVMAVAIQSEREVMRMHVFPKFTERRGLLSAYETIQTILGFGMFTIALIALIVKLLKNDKKK

Download         Length: 198 bp

>T123767 NZ_CP039296:3139571-3139768 [Enterococcus faecalis]
ATGTGTAGAGAAGTTATGGCGGTGGCTATCCAATCTGAAAGAGAGGTGATGCGTATGCACGTATTTCCGAAATTCACAGA
AAGGAGAGGCCTTTTGTCAGCATATGAAACAATTCAGACAATTCTTGGGTTTGGTATGTTTACCATTGCTTTGATTGCGC
TGATTGTGAAATTGCTTAAAAATGACAAGAAAAAATAA

Antitoxin


Download         Length: 256 bp

>AT123767 NZ_CP039296:c3139956-3139701 [Enterococcus faecalis]
ATAAAAATGCCCGAGCCTTGAAATAGGAGGCTCAGGCATTTTTTATTGATGGTCTTTTTAGGGTTGTTGTGCTATAATGA
TAAAGAAAAGAGAGATATGCTTCCAACATATCTCTCTGATGTAGAGCCGTTTAAGACGGTGACCAATTTTATTATTTAAA
AATAACCGTGCTTGGTCAAAGTAGACGGTTATTTTTTCTTGTCATTTTTAAGCAATTTCACAATCAGCGCAATCAAAGCA
ATGGTAAACATACCAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A4U3MBY2


Antitoxin

Download structure file

References