120851

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 1003999..1004160 Replicon chromosome
Accession NZ_CP038242
Organism Staphylococcus warneri strain GD01

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag EOJ31_RS04980 Protein ID WP_015364873.1
Coordinates 1003999..1004094 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 1004126..1004160 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
EOJ31_RS04970 999969..1002902 + 2934 WP_189723574.1 AAA family ATPase -
EOJ31_RS04975 1002902..1003843 + 942 WP_002466800.1 3'-5' exoribonuclease YhaM -
EOJ31_RS04980 1003999..1004094 + 96 WP_015364873.1 type I toxin-antitoxin system Fst family toxin Toxin
- 1004126..1004160 - 35 - - Antitoxin
EOJ31_RS04985 1004246..1005238 - 993 WP_002466825.1 peptidylprolyl isomerase -
EOJ31_RS04990 1005416..1005973 - 558 WP_002466819.1 DUF3267 domain-containing protein -
EOJ31_RS04995 1006168..1006539 - 372 WP_002452114.1 YtxH domain-containing protein -
EOJ31_RS05000 1006617..1007042 - 426 WP_002466803.1 HIT family protein -
EOJ31_RS05005 1007174..1007914 + 741 WP_002466806.1 ABC transporter ATP-binding protein -
EOJ31_RS05010 1007907..1009130 + 1224 WP_189723576.1 ABC transporter permease -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3610.26 Da        Isoelectric Point: 8.0878

>T120851 WP_015364873.1 NZ_CP038242:1003999-1004094 [Staphylococcus warneri]
MTEIFVHIATTVISGCIVTLFAHWLRHRNDK

Download         Length: 96 bp

>T120851 NZ_CP038242:1003999-1004094 [Staphylococcus warneri]
ATGACTGAAATCTTTGTTCATATCGCAACTACTGTTATTAGTGGTTGTATCGTTACATTATTTGCGCATTGGCTACGCCA
TCGTAACGACAAGTAA

Antitoxin


Download         Length: 35 bp

>AT120851 NZ_CP038242:c1004160-1004126 [Staphylococcus warneri]
ACACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References