Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) tacAT/DUF1778(antitoxin)
Location 4327464..4328239 Replicon chromosome
Accession NZ_CP036371
Organism Klebsiella pneumoniae strain WCHKP020037

Toxin (Protein)


Gene name TacT2 Uniprot ID A0A1Q4Q548
Locus tag CEA76_RS21875 Protein ID WP_004150910.1
Coordinates 4327464..4327949 (-) Length 162 a.a.

Antitoxin (Protein)


Gene name TacA2 Uniprot ID W8UEW1
Locus tag CEA76_RS21880 Protein ID WP_004150912.1
Coordinates 4327946..4328239 (-) Length 98 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CEA76_RS21845 4322633..4324000 - 1368 WP_004150905.1 replicative DNA helicase -
CEA76_RS21850 4323993..4324376 - 384 WP_004150906.1 hypothetical protein -
CEA76_RS21855 4324376..4325248 - 873 WP_004188557.1 ParA family protein -
CEA76_RS21865 4325854..4326070 - 217 Protein_4206 transposase -
CEA76_RS21870 4326167..4326760 - 594 WP_004188553.1 hypothetical protein -
CEA76_RS21875 4327464..4327949 - 486 WP_004150910.1 GNAT family N-acetyltransferase Toxin
CEA76_RS21880 4327946..4328239 - 294 WP_004150912.1 DUF1778 domain-containing protein Antitoxin
CEA76_RS21885 4328884..4330260 + 1377 WP_004217775.1 cystathionine beta-synthase -
CEA76_RS21890 4330271..4331419 + 1149 WP_004150915.1 PLP-dependent aspartate aminotransferase family protein -
CEA76_RS21895 4331420..4332331 - 912 WP_004188550.1 LysR family transcriptional regulator -
CEA76_RS21900 4332429..4333031 + 603 WP_062954968.1 short chain dehydrogenase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
inside Integrative and Conjugative Element - - 4269244..4328490 59246
flank IS/Tn - - 4325918..4326070 152


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(41-143)

Antitoxin

Vibrio phage ICP1, Orf50

(3-95)


Sequences

Toxin        


Download         Length: 162 a.a.        Molecular weight: 17551.59 Da        Isoelectric Point: 8.8818

>T119676 WP_004150910.1 NZ_CP036371:c4327949-4327464 [Klebsiella pneumoniae]
MISAPEPLHAGHILTPFCCGIDSMDHWLKQRAMKNQVTGASRTFVCCDDAKVMAYYSLASSAVTTNTAPGRFRRNMPAPI
PVVVLGRLAVDKSLHGKGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEARDFYLRVGFEPSPMDPMMLMVTLRDLVN
A

Download         Length: 486 bp

>T119676 NZ_CP036371:c4327949-4327464 [Klebsiella pneumoniae]
ATGATCTCGGCACCAGAACCGCTTCATGCCGGGCATATTCTTACCCCGTTTTGCTGCGGTATAGATTCCATGGATCACTG
GCTGAAACAGCGGGCGATGAAAAATCAGGTTACTGGCGCATCCCGCACCTTTGTCTGCTGCGACGACGCGAAGGTGATGG
CTTACTACTCACTGGCTTCCAGCGCTGTGACGACAAATACTGCGCCGGGTCGTTTTCGCCGCAATATGCCTGCCCCGATC
CCGGTTGTGGTACTGGGTCGTCTGGCGGTGGATAAATCACTACATGGGAAAGGTGTCGGGCGGGCCCTGGTACGTGATGC
CGGGCTGCGTGTGATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTTCACGCCCTGTCGGATGAAGCACGGG
ATTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGAGGGATTTGGTTAAT
GCCTGA

Antitoxin


Download         Length: 98 a.a.        Molecular weight: 10901.46 Da        Isoelectric Point: 6.3783

>AT119676 WP_004150912.1 NZ_CP036371:c4328239-4327946 [Klebsiella pneumoniae]
MPAANSMSIKRETLNLRIKPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYQEFLARLDQAPAPN
AALRKTMQTPAPWEQEE

Download         Length: 294 bp

>AT119676 NZ_CP036371:c4328239-4327946 [Klebsiella pneumoniae]
ATGCCAGCCGCAAACAGCATGTCCATAAAACGCGAAACGTTAAATCTGCGCATTAAACCTGCCGAACGCGATCTTATTGA
TCGGGCGGCGAAAGCCAGAGGGAAAAACCGCACAGACTTTGTGCTGGAGGCCGCCCGCGCTGCCGCTGAGGAAGCGCTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATCAGGAATTTCTCGCTCGTCTGGATCAGGCTCCTGCACCTAAT
GCCGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAACAGGAAGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A1Q4Q548

Antitoxin

Source ID Structure
AlphaFold DB A0A0H3GVL4

References