Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | higBA (relBE)/HigB-HigA |
| Location | 1427225..1427808 | Replicon | chromosome |
| Accession | NZ_CP035284 | ||
| Organism | Paracoccus versutus strain UW1 | ||
Toxin (Protein)
| Gene name | graT | Uniprot ID | A0A3E0BZ42 |
| Locus tag | EQ718_RS07135 | Protein ID | WP_036749952.1 |
| Coordinates | 1427225..1427506 (+) | Length | 94 a.a. |
Antitoxin (Protein)
| Gene name | higA | Uniprot ID | - |
| Locus tag | EQ718_RS07140 | Protein ID | WP_036749954.1 |
| Coordinates | 1427518..1427808 (+) | Length | 97 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EQ718_RS07095 (EQ718_07045) | 1422325..1422942 | - | 618 | WP_036749936.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| EQ718_RS07100 (EQ718_07050) | 1423056..1423853 | - | 798 | WP_036749939.1 | tryptophan synthase subunit alpha | - |
| EQ718_RS07105 (EQ718_07055) | 1423980..1425077 | + | 1098 | WP_036749941.1 | redox-regulated ATPase YchF | - |
| EQ718_RS07115 (EQ718_07065) | 1425819..1426211 | - | 393 | WP_036749944.1 | transposase domain-containing protein | - |
| EQ718_RS07120 (EQ718_07070) | 1426270..1426464 | - | 195 | Protein_1401 | putative addiction module antidote protein | - |
| EQ718_RS07125 (EQ718_07075) | 1426467..1426763 | - | 297 | WP_036749947.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| EQ718_RS07130 (EQ718_07080) | 1426874..1427062 | - | 189 | WP_036749949.1 | hypothetical protein | - |
| EQ718_RS07135 (EQ718_07085) | 1427225..1427506 | + | 282 | WP_036749952.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| EQ718_RS07140 (EQ718_07090) | 1427518..1427808 | + | 291 | WP_036749954.1 | HigA family addiction module antitoxin | Antitoxin |
| EQ718_RS07145 (EQ718_07095) | 1428010..1428393 | - | 384 | WP_036749957.1 | DoxX family protein | - |
| EQ718_RS07150 | 1428794..1428952 | + | 159 | WP_157034045.1 | hypothetical protein | - |
| EQ718_RS07155 (EQ718_07105) | 1428949..1429314 | + | 366 | WP_036749963.1 | helix-turn-helix domain-containing protein | - |
| EQ718_RS07160 (EQ718_07110) | 1429398..1429913 | + | 516 | WP_036749966.1 | hypothetical protein | - |
| EQ718_RS07165 (EQ718_07115) | 1430155..1430547 | + | 393 | WP_036749968.1 | hypothetical protein | - |
| EQ718_RS07170 (EQ718_07120) | 1430740..1431105 | + | 366 | WP_036749970.1 | DUF983 domain-containing protein | - |
| EQ718_RS07175 (EQ718_07125) | 1431163..1431363 | - | 201 | WP_036749972.1 | hypothetical protein | - |
| EQ718_RS07180 (EQ718_07130) | 1431427..1431798 | - | 372 | WP_036749973.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 94 a.a. Molecular weight: 10211.77 Da Isoelectric Point: 9.9427
>T117542 WP_036749952.1 NZ_CP035284:1427225-1427506 [Paracoccus versutus]
MIQSIRGELTAQVLAGKPGKGFPANLSKIAVRKVAMLQAAHVLDDLRAPPANRLEALKGDRAGQHSIRVNDPWRICFTWT
QNGPADVEIVDYH
MIQSIRGELTAQVLAGKPGKGFPANLSKIAVRKVAMLQAAHVLDDLRAPPANRLEALKGDRAGQHSIRVNDPWRICFTWT
QNGPADVEIVDYH
Download Length: 282 bp
>T117542 NZ_CP035284:1427225-1427506 [Paracoccus versutus]
ATGATACAGAGCATCAGAGGCGAGTTGACCGCGCAGGTCCTGGCTGGCAAGCCGGGCAAGGGCTTTCCCGCCAACCTGTC
CAAGATCGCCGTCCGCAAGGTGGCGATGCTGCAAGCGGCTCACGTCCTGGACGACCTGCGGGCGCCCCCGGCGAACCGGC
TGGAAGCCCTCAAGGGCGATAGGGCGGGCCAGCATTCGATCCGGGTCAACGACCCGTGGCGCATCTGTTTCACCTGGACC
CAGAACGGCCCTGCCGATGTCGAAATCGTGGACTACCACTGA
ATGATACAGAGCATCAGAGGCGAGTTGACCGCGCAGGTCCTGGCTGGCAAGCCGGGCAAGGGCTTTCCCGCCAACCTGTC
CAAGATCGCCGTCCGCAAGGTGGCGATGCTGCAAGCGGCTCACGTCCTGGACGACCTGCGGGCGCCCCCGGCGAACCGGC
TGGAAGCCCTCAAGGGCGATAGGGCGGGCCAGCATTCGATCCGGGTCAACGACCCGTGGCGCATCTGTTTCACCTGGACC
CAGAACGGCCCTGCCGATGTCGAAATCGTGGACTACCACTGA
Antitoxin
Download Length: 97 a.a. Molecular weight: 10691.34 Da Isoelectric Point: 4.8000
>AT117542 WP_036749954.1 NZ_CP035284:1427518-1427808 [Paracoccus versutus]
MTMLQVPVHPGEILKEEFLDELGISAGKLARHVHVPRTRIERLVKEETAMTVDTAQRLAKALGTSVEFWMNLQLNYDLIT
NTPDPDVADIQPLAAA
MTMLQVPVHPGEILKEEFLDELGISAGKLARHVHVPRTRIERLVKEETAMTVDTAQRLAKALGTSVEFWMNLQLNYDLIT
NTPDPDVADIQPLAAA
Download Length: 291 bp
>AT117542 NZ_CP035284:1427518-1427808 [Paracoccus versutus]
ATGACCATGCTGCAAGTGCCGGTCCATCCCGGCGAAATCCTGAAGGAAGAATTCCTGGACGAGTTGGGGATCAGCGCCGG
CAAGCTGGCCCGGCATGTCCATGTGCCCCGCACCCGCATCGAGCGCCTGGTGAAGGAAGAAACCGCCATGACCGTGGACA
CGGCGCAGCGGCTCGCCAAGGCTCTGGGAACCTCGGTGGAGTTCTGGATGAACCTTCAGCTGAACTACGACCTGATTACG
AACACGCCAGATCCAGACGTGGCCGATATCCAGCCGCTGGCAGCGGCGTGA
ATGACCATGCTGCAAGTGCCGGTCCATCCCGGCGAAATCCTGAAGGAAGAATTCCTGGACGAGTTGGGGATCAGCGCCGG
CAAGCTGGCCCGGCATGTCCATGTGCCCCGCACCCGCATCGAGCGCCTGGTGAAGGAAGAAACCGCCATGACCGTGGACA
CGGCGCAGCGGCTCGCCAAGGCTCTGGGAACCTCGGTGGAGTTCTGGATGAACCTTCAGCTGAACTACGACCTGATTACG
AACACGCCAGATCCAGACGTGGCCGATATCCAGCCGCTGGCAGCGGCGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|