Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 2185728..2185945 | Replicon | chromosome |
Accession | NZ_CP035165 | ||
Organism | Bacillus subtilis strain SRCM103881 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | A0A6H0WKE8 |
Locus tag | EQI56_RS11225 | Protein ID | WP_032721653.1 |
Coordinates | 2185769..2185945 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 2185728..2185828 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
EQI56_RS11175 | 2180862..2181299 | - | 438 | WP_114168600.1 | hypothetical protein | - |
EQI56_RS11180 | 2181390..2181773 | - | 384 | WP_114168681.1 | UPF0715 family protein | - |
EQI56_RS11185 | 2181853..2182188 | - | 336 | WP_114168602.1 | hypothetical protein | - |
EQI56_RS11190 | 2182226..2182522 | - | 297 | WP_114168604.1 | hypothetical protein | - |
EQI56_RS11195 | 2182598..2182843 | - | 246 | WP_114168606.1 | hypothetical protein | - |
EQI56_RS11200 | 2183042..2183323 | - | 282 | WP_050496376.1 | hypothetical protein | - |
EQI56_RS11205 | 2183357..2183611 | - | 255 | WP_100244913.1 | hypothetical protein | - |
EQI56_RS11210 | 2183967..2185184 | - | 1218 | WP_114168608.1 | hypothetical protein | - |
EQI56_RS11215 | 2185266..2185454 | - | 189 | WP_114168610.1 | hypothetical protein | - |
EQI56_RS11220 | 2185499..2185750 | - | 252 | WP_080010576.1 | hypothetical protein | - |
- | 2185728..2185828 | + | 101 | - | - | Antitoxin |
EQI56_RS11225 | 2185769..2185945 | - | 177 | WP_032721653.1 | hypothetical protein | Toxin |
- | 2185886..2185986 | + | 101 | NuclAT_0 | - | - |
- | 2185886..2185986 | + | 101 | NuclAT_0 | - | - |
- | 2185886..2185986 | + | 101 | NuclAT_0 | - | - |
- | 2185886..2185986 | + | 101 | NuclAT_0 | - | - |
EQI56_RS11230 | 2186900..2187094 | + | 195 | WP_003230986.1 | hypothetical protein | - |
EQI56_RS11235 | 2187134..2189653 | + | 2520 | WP_019712270.1 | hypothetical protein | - |
EQI56_RS11240 | 2189897..2190175 | + | 279 | WP_004399274.1 | HU-related DNA-binding protein HupN | - |
EQI56_RS11245 | 2190745..2190915 | + | 171 | WP_128472249.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2116141..2264885 | 148744 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6850.39 Da Isoelectric Point: 12.8833
>T117271 WP_032721653.1 NZ_CP035165:c2185945-2185769 [Bacillus subtilis]
VLEKVGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIVVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T117271 NZ_CP035165:c2185945-2185769 [Bacillus subtilis]
GTGCTTGAGAAAGTGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAGTGGGTATCGTAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT117271 NZ_CP035165:2185728-2185828 [Bacillus subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCGGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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