Detailed information of TA system
Overview
TA module
| Type | I | Classification (family/domain) | bsrG-as-bsrG/- |
| Location | 2268828..2269118 | Replicon | chromosome |
| Accession | NZ_CP034484 | ||
| Organism | Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10 strain NCIB 3610 | ||
Toxin (Protein)
| Gene name | bsrG | Uniprot ID | L8EAY0 |
| Locus tag | EJJ34_RS11825 | Protein ID | WP_009967548.1 |
| Coordinates | 2268828..2268944 (+) | Length | 39 a.a. |
Antitoxin (RNA)
| Gene name | as-bsrG | ||
| Locus tag | - | ||
| Coordinates | 2268939..2269118 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EJJ34_RS11790 (EJJ34_11795) | 2264755..2264925 | - | 171 | WP_009967544.1 | bacteriocin sublancin-168 | - |
| EJJ34_RS11795 (EJJ34_11800) | 2265222..2265539 | - | 318 | WP_009967545.1 | sublancin immunity protein SunI | - |
| EJJ34_RS11800 (EJJ34_11805) | 2265641..2266891 | - | 1251 | WP_004398504.1 | UV-damage repair protein uvrX | - |
| EJJ34_RS11805 (EJJ34_11810) | 2266884..2267216 | - | 333 | WP_004398710.1 | YolD-like family protein | - |
| EJJ34_RS11810 (EJJ34_11815) | 2267390..2267725 | + | 336 | WP_004399073.1 | hypothetical protein | - |
| EJJ34_RS11815 (EJJ34_11820) | 2267768..2268124 | - | 357 | WP_004398595.1 | hypothetical protein | - |
| EJJ34_RS11820 (EJJ34_11825) | 2268130..2268597 | - | 468 | WP_003246138.1 | YolA family protein | - |
| EJJ34_RS11825 (EJJ34_11830) | 2268828..2268944 | + | 117 | WP_009967548.1 | type I toxin-antitoxin system toxin BsrG | Toxin |
| - | 2268939..2269118 | - | 180 | - | - | Antitoxin |
| EJJ34_RS11830 (EJJ34_11835) | 2269223..2269756 | - | 534 | WP_004399156.1 | GNAT family protein | - |
| EJJ34_RS11835 (EJJ34_11840) | 2269792..2270370 | - | 579 | WP_004399123.1 | SMI1/KNR4 family protein | - |
| EJJ34_RS11840 (EJJ34_11845) | 2270434..2270931 | - | 498 | WP_003246188.1 | SMI1/KNR4 family protein | - |
| EJJ34_RS11845 (EJJ34_11850) | 2270940..2272655 | - | 1716 | WP_004398855.1 | ribonuclease YeeF family protein | - |
| EJJ34_RS11850 (EJJ34_11855) | 2272755..2273312 | - | 558 | WP_003246042.1 | SMI1/KNR4 family protein | - |
| EJJ34_RS11855 (EJJ34_11860) | 2273447..2273581 | + | 135 | WP_234047931.1 | transposase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 39 a.a. Molecular weight: 5016.81 Da Isoelectric Point: 12.3798
>T116175 WP_009967548.1 NZ_CP034484:2268828-2268944 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
Download Length: 117 bp
>T116175 NZ_CP034484:2268828-2268944 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
Antitoxin
Download Length: 180 bp
>AT116175 NZ_CP034484:c2269118-2268939 [Bacillus subtilis subsp. subtilis NCIB 3610 = ATCC 6051 = DSM 10]
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Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
