Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | mqsRA (relBE)/MqsR-MqsA |
| Location | 3893453..3894153 | Replicon | chromosome |
| Accession | NZ_CP034337 | ||
| Organism | Pseudomonas entomophila strain 2014 | ||
Toxin (Protein)
| Gene name | mqsR | Uniprot ID | - |
| Locus tag | EI693_RS18150 | Protein ID | WP_125464901.1 |
| Coordinates | 3893857..3894153 (-) | Length | 99 a.a. |
Antitoxin (Protein)
| Gene name | mqsA | Uniprot ID | - |
| Locus tag | EI693_RS18145 | Protein ID | WP_125464900.1 |
| Coordinates | 3893453..3893854 (-) | Length | 134 a.a. |
Genomic Context
Location: 3891711..3893393 (1683 bp)
Type: Others
Protein ID: WP_125464899.1
Type: Others
Protein ID: WP_125464899.1
Location: 3896984..3898159 (1176 bp)
Type: Others
Protein ID: WP_125464905.1
Type: Others
Protein ID: WP_125464905.1
Location: 3888597..3889418 (822 bp)
Type: Others
Protein ID: WP_125464896.1
Type: Others
Protein ID: WP_125464896.1
Location: 3889503..3890432 (930 bp)
Type: Others
Protein ID: WP_125464897.1
Type: Others
Protein ID: WP_125464897.1
Location: 3890433..3891182 (750 bp)
Type: Others
Protein ID: WP_125464898.1
Type: Others
Protein ID: WP_125464898.1
Location: 3893453..3893854 (402 bp)
Type: Antitoxin
Protein ID: WP_125464900.1
Type: Antitoxin
Protein ID: WP_125464900.1
Location: 3893857..3894153 (297 bp)
Type: Toxin
Protein ID: WP_125464901.1
Type: Toxin
Protein ID: WP_125464901.1
Location: 3894248..3895573 (1326 bp)
Type: Others
Protein ID: WP_125464902.1
Type: Others
Protein ID: WP_125464902.1
Location: 3895635..3896120 (486 bp)
Type: Others
Protein ID: WP_125464903.1
Type: Others
Protein ID: WP_125464903.1
Location: 3896289..3896765 (477 bp)
Type: Others
Protein ID: WP_125464904.1
Type: Others
Protein ID: WP_125464904.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EI693_RS18125 | 3888597..3889418 | - | 822 | WP_125464896.1 | transporter substrate-binding domain-containing protein | - |
| EI693_RS18130 | 3889503..3890432 | - | 930 | WP_125464897.1 | FAD-binding protein | - |
| EI693_RS18135 | 3890433..3891182 | - | 750 | WP_125464898.1 | electron transfer flavoprotein subunit beta/FixA family protein | - |
| EI693_RS18140 | 3891711..3893393 | + | 1683 | WP_125464899.1 | electron transfer flavoprotein-ubiquinone oxidoreductase | - |
| EI693_RS18145 | 3893453..3893854 | - | 402 | WP_125464900.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin |
| EI693_RS18150 | 3893857..3894153 | - | 297 | WP_125464901.1 | type II toxin-antitoxin system MqsR family toxin | Toxin |
| EI693_RS18155 | 3894248..3895573 | - | 1326 | WP_125464902.1 | MFS transporter | - |
| EI693_RS18160 | 3895635..3896120 | - | 486 | WP_125464903.1 | histidine kinase | - |
| EI693_RS18165 | 3896289..3896765 | - | 477 | WP_125464904.1 | sigma-70 family RNA polymerase sigma factor | - |
| EI693_RS18170 | 3896984..3898159 | + | 1176 | WP_125464905.1 | efflux RND transporter periplasmic adaptor subunit | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 99 a.a. Molecular weight: 11153.07 Da Isoelectric Point: 8.9903
>T115745 WP_125464901.1 NZ_CP034337:c3894153-3893857 [Pseudomonas entomophila]
MEKRMPHCPLDRVKALLAAKRVSPTSAALRGARSLGLDYPGMLDVISSLERTDFYKSMTCYTEHRVWQDVYRPLTAVGYV
YLKLSVVDDVLIVSFKEL
MEKRMPHCPLDRVKALLAAKRVSPTSAALRGARSLGLDYPGMLDVISSLERTDFYKSMTCYTEHRVWQDVYRPLTAVGYV
YLKLSVVDDVLIVSFKEL
Download Length: 297 bp
>T115745 NZ_CP034337:c3894153-3893857 [Pseudomonas entomophila]
ATGGAAAAGAGAATGCCTCATTGCCCACTTGATCGGGTAAAAGCGCTGCTTGCTGCGAAGCGGGTCAGTCCGACTAGCGC
TGCATTAAGAGGTGCCAGGTCTCTGGGCCTGGATTACCCAGGAATGCTCGATGTGATCAGCAGTCTGGAACGCACTGACT
TTTACAAAAGCATGACCTGCTATACGGAACACCGCGTCTGGCAGGACGTATACCGTCCGCTCACGGCAGTCGGCTACGTT
TACCTGAAACTGTCAGTGGTCGATGACGTGCTCATCGTGTCCTTCAAGGAGCTGTAA
ATGGAAAAGAGAATGCCTCATTGCCCACTTGATCGGGTAAAAGCGCTGCTTGCTGCGAAGCGGGTCAGTCCGACTAGCGC
TGCATTAAGAGGTGCCAGGTCTCTGGGCCTGGATTACCCAGGAATGCTCGATGTGATCAGCAGTCTGGAACGCACTGACT
TTTACAAAAGCATGACCTGCTATACGGAACACCGCGTCTGGCAGGACGTATACCGTCCGCTCACGGCAGTCGGCTACGTT
TACCTGAAACTGTCAGTGGTCGATGACGTGCTCATCGTGTCCTTCAAGGAGCTGTAA
Antitoxin
Download Length: 134 a.a. Molecular weight: 14664.61 Da Isoelectric Point: 4.9775
>AT115745 WP_125464900.1 NZ_CP034337:c3893854-3893453 [Pseudomonas entomophila]
MRCPICGGAELAPDTQDMPYRYKGESTLIQGVSGDYCSACGEAVLSHDEAMRVSEQMTAFERRVNATAVDPAFISAVRKK
FDLDQREAGEIFGGGVNAFSRYENGKTTPPVALIKLFKLLDRHPELFEEVRTA
MRCPICGGAELAPDTQDMPYRYKGESTLIQGVSGDYCSACGEAVLSHDEAMRVSEQMTAFERRVNATAVDPAFISAVRKK
FDLDQREAGEIFGGGVNAFSRYENGKTTPPVALIKLFKLLDRHPELFEEVRTA
Download Length: 402 bp
>AT115745 NZ_CP034337:c3893854-3893453 [Pseudomonas entomophila]
ATGAGATGCCCGATCTGCGGTGGTGCGGAGCTTGCGCCAGATACTCAGGACATGCCCTATCGCTACAAAGGAGAGTCGAC
TCTGATCCAGGGCGTCAGCGGCGATTACTGCTCTGCCTGTGGTGAGGCGGTCCTGAGCCACGACGAAGCCATGCGTGTCA
GTGAGCAGATGACGGCCTTTGAGCGTCGGGTCAATGCGACTGCGGTCGATCCAGCTTTCATCAGCGCCGTGCGCAAGAAA
TTTGACCTGGACCAGCGCGAGGCAGGTGAGATTTTCGGTGGTGGGGTCAACGCTTTTTCCCGCTACGAAAATGGTAAAAC
CACGCCGCCAGTGGCGTTGATCAAGCTGTTCAAGCTGCTCGACCGCCACCCCGAGCTGTTCGAGGAAGTCAGGACCGCCT
GA
ATGAGATGCCCGATCTGCGGTGGTGCGGAGCTTGCGCCAGATACTCAGGACATGCCCTATCGCTACAAAGGAGAGTCGAC
TCTGATCCAGGGCGTCAGCGGCGATTACTGCTCTGCCTGTGGTGAGGCGGTCCTGAGCCACGACGAAGCCATGCGTGTCA
GTGAGCAGATGACGGCCTTTGAGCGTCGGGTCAATGCGACTGCGGTCGATCCAGCTTTCATCAGCGCCGTGCGCAAGAAA
TTTGACCTGGACCAGCGCGAGGCAGGTGAGATTTTCGGTGGTGGGGTCAACGCTTTTTCCCGCTACGAAAATGGTAAAAC
CACGCCGCCAGTGGCGTTGATCAAGCTGTTCAAGCTGCTCGACCGCCACCCCGAGCTGTTCGAGGAAGTCAGGACCGCCT
GA