Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) SprA2-sprA1AS/-
Location 2504701..2504849 Replicon chromosome
Accession NZ_CP033460
Organism Staphylococcus debuckii strain SDB 2975

Toxin (Protein)


Gene name SprA2 Uniprot ID -
Locus tag CNQ82_RS12130 Protein ID WP_011276848.1
Coordinates 2504754..2504849 (-) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 2504701..2504736 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CNQ82_RS12115 2501331..2502764 + 1434 WP_031926379.1 multi-copper oxidase Mco -
CNQ82_RS12120 2502784..2503329 + 546 WP_002510756.1 YdhK family protein -
CNQ82_RS12125 2503629..2504504 - 876 WP_123145472.1 hypothetical protein -
- 2504701..2504736 - 36 - - Antitoxin
CNQ82_RS12130 2504754..2504849 - 96 WP_011276848.1 type I toxin-antitoxin system Fst family toxin Toxin
CNQ82_RS12135 2505351..2506745 - 1395 WP_123145473.1 transcriptional regulator -
CNQ82_RS12140 2506948..2507382 - 435 WP_123145474.1 hypothetical protein -
CNQ82_RS12145 2508084..2508290 + 207 WP_115347105.1 DUF3923 family protein -
CNQ82_RS12150 2508558..2508905 - 348 WP_037538777.1 metalloregulator ArsR/SmtB family transcription factor -
CNQ82_RS12155 2508923..2509540 - 618 WP_037538780.1 CadD family cadmium resistance transporter -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3623.38 Da        Isoelectric Point: 9.5124

>T113721 WP_011276848.1 NZ_CP033460:c2504849-2504754 [Staphylococcus debuckii]
MLEILVHITTTVISGCIIALFTHWLRNRKDK

Download         Length: 96 bp

>T113721 NZ_CP033460:c2504849-2504754 [Staphylococcus debuckii]
ATGTTGGAAATCCTTGTTCACATCACGACCACAGTCATCAGTGGTTGTATTATTGCGTTATTTACGCATTGGCTGCGTAA
TCGCAAAGACAAATAG

Antitoxin


Download         Length: 36 bp

>AT113721 NZ_CP033460:c2504736-2504701 [Staphylococcus debuckii]
TACAAAAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References