Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type I Classification (family/domain) sprA1-sprA1AS/-
Location 644827..644988 Replicon chromosome
Accession NZ_CP033460
Organism Staphylococcus debuckii strain SDB 2975

Toxin (Protein)


Gene name sprA1 Uniprot ID -
Locus tag CNQ82_RS02810 Protein ID WP_123143993.1
Coordinates 644827..644922 (+) Length 32 a.a.

Antitoxin (RNA)


Gene name sprA1AS
Locus tag -
Coordinates 644951..644988 (-)

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CNQ82_RS02800 641185..642927 + 1743 WP_123143991.1 ABC transporter ATP-binding protein/permease -
CNQ82_RS02805 642927..644654 + 1728 WP_123143992.1 ABC transporter ATP-binding protein/permease -
CNQ82_RS02810 644827..644922 + 96 WP_123143993.1 type I toxin-antitoxin system Fst family toxin Toxin
- 644951..644988 - 38 - - Antitoxin
CNQ82_RS02815 645182..646072 - 891 WP_123143994.1 fructose bisphosphate aldolase -
CNQ82_RS02820 646241..646947 + 707 Protein_524 MOSC domain-containing protein -
CNQ82_RS02825 647466..647723 - 258 WP_123143995.1 zinc ribbon domain-containing protein -
CNQ82_RS02830 647723..648903 - 1181 Protein_526 acetamidase/formamidase family protein -
CNQ82_RS02835 649150..649449 + 300 WP_095107205.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.



Sequences

Toxin        


Download         Length: 32 a.a.        Molecular weight: 3617.39 Da        Isoelectric Point: 9.9256

>T113716 WP_123143993.1 NZ_CP033460:644827-644922 [Staphylococcus debuckii]
MQMIFLHIIAPVISGCVVAYFTYWLSSKRNK

Download         Length: 96 bp

>T113716 NZ_CP033460:644827-644922 [Staphylococcus debuckii]
ATGCAAATGATTTTCTTACACATCATTGCGCCAGTCATCAGTGGCTGTGTAGTTGCGTACTTTACTTATTGGCTTAGTAG
TAAACGTAATAAATAA

Antitoxin


Download         Length: 38 bp

>AT113716 NZ_CP033460:c644988-644951 [Staphylococcus debuckii]
TATGCACCAATCCCCTCACTATTTGCGGTAGTGAGGGG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Download structure file

References