Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-as-bsrH/- |
Location | 2185280..2185497 | Replicon | chromosome |
Accession | NZ_CP033064 | ||
Organism | Bacillus sp. WR11 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | - |
Locus tag | D9C22_RS11255 | Protein ID | WP_019712271.1 |
Coordinates | 2185280..2185456 (-) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | as-bsrH | ||
Locus tag | - | ||
Coordinates | 2185397..2185497 (+) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
D9C22_RS11220 | 2181157..2181378 | - | 222 | WP_128751206.1 | hypothetical protein | - |
D9C22_RS11225 | 2181375..2181776 | - | 402 | WP_128751207.1 | hypothetical protein | - |
D9C22_RS11230 | 2181822..2182259 | - | 438 | WP_128751208.1 | hypothetical protein | - |
D9C22_RS11235 | 2182575..2183792 | - | 1218 | WP_128751209.1 | hypothetical protein | - |
D9C22_RS11240 | 2183811..2184656 | - | 846 | WP_128751210.1 | GIY-YIG nuclease family protein | - |
D9C22_RS11245 | 2184777..2184965 | - | 189 | WP_128751211.1 | hypothetical protein | - |
D9C22_RS11250 | 2185010..2185261 | - | 252 | WP_080010576.1 | hypothetical protein | - |
D9C22_RS11255 | 2185280..2185456 | - | 177 | WP_019712271.1 | hypothetical protein | Toxin |
- | 2185397..2185497 | + | 101 | NuclAT_1 | - | Antitoxin |
- | 2185397..2185497 | + | 101 | NuclAT_1 | - | Antitoxin |
- | 2185397..2185497 | + | 101 | NuclAT_1 | - | Antitoxin |
- | 2185397..2185497 | + | 101 | NuclAT_1 | - | Antitoxin |
D9C22_RS11265 | 2185997..2186608 | - | 612 | WP_074794693.1 | hypothetical protein | - |
D9C22_RS11270 | 2186809..2187138 | - | 330 | WP_032721651.1 | helix-turn-helix domain-containing protein | - |
D9C22_RS11275 | 2188093..2188287 | + | 195 | WP_072692657.1 | hypothetical protein | - |
D9C22_RS11280 | 2188327..2190201 | + | 1875 | Protein_2149 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 2116100..2247070 | 130970 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6864.42 Da Isoelectric Point: 12.8833
>T113034 WP_019712271.1 NZ_CP033064:c2185456-2185280 [Bacillus sp. WR11]
VLEKVGIIVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIIVAFLISLTVLTINSLTIVEKVRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T113034 NZ_CP033064:c2185456-2185280 [Bacillus sp. WR11]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTTCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTTCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGGTAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCCGATGA
Antitoxin
Download Length: 101 bp
>AT113034 NZ_CP033064:2185397-2185497 [Bacillus sp. WR11]
GATTGTAAGAACCGTTAAAGATATGAGAAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
GATTGTAAGAACCGTTAAAGATATGAGAAAAGCAACTATGATACCCACTTTCTCAAGCACTATGTACACCTCCTTTCCTA
TGACTCTATTATAACATAATT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
---|