112685

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type I Classification (family/domain) yonT-SR6/-
Location 3443543..3443760 Replicon chromosome
Accession NZ_CP032860
Organism Bacillus subtilis subsp. subtilis strain SSJ-1

Toxin (Protein)


Gene name yonT Uniprot ID -
Locus tag D9C14_RS17690 Protein ID WP_017696861.1
Coordinates 3443543..3443719 (+) Length 59 a.a.

Antitoxin (RNA)


Gene name SR6
Locus tag -
Coordinates 3443660..3443760 (-)

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
D9C14_RS17675 3439024..3441546 - 2523 WP_121572576.1 hypothetical protein -
D9C14_RS17680 3441591..3441770 - 180 WP_064814709.1 hypothetical protein -
D9C14_RS17685 3442324..3442644 + 321 WP_162983476.1 hypothetical protein -
- 3443503..3443602 - 100 NuclAT_0 - -
- 3443503..3443602 - 100 NuclAT_0 - -
- 3443503..3443602 - 100 NuclAT_0 - -
- 3443503..3443602 - 100 NuclAT_0 - -
D9C14_RS17690 3443543..3443719 + 177 WP_017696861.1 hypothetical protein Toxin
- 3443660..3443760 - 101 - - Antitoxin
D9C14_RS17695 3443738..3443989 + 252 WP_121572578.1 hypothetical protein -
D9C14_RS17700 3444034..3444192 + 159 WP_121572579.1 hypothetical protein -
D9C14_RS17705 3444280..3445497 + 1218 WP_121572580.1 hypothetical protein -
D9C14_RS17710 3445825..3447693 + 1869 WP_162983477.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Prophage - - 3377178..3547414 170236


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.



Sequences


Toxin        


Download         Length: 59 a.a.        Molecular weight: 6878.45 Da        Isoelectric Point: 12.8833

>T112685 WP_017696861.1 NZ_CP032860:3443543-3443719 [Bacillus subtilis subsp. subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR

Download         Length: 177 bp

>T112685 NZ_CP032860:3443543-3443719 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCAGATGA

Antitoxin


Download         Length: 101 bp

>AT112685 NZ_CP032860:c3443760-3443660 [Bacillus subtilis subsp. subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCTGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Download structure file

References