Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | I | Classification (family/domain) | yonT-SR6/- |
Location | 3443543..3443760 | Replicon | chromosome |
Accession | NZ_CP032860 | ||
Organism | Bacillus subtilis subsp. subtilis strain SSJ-1 |
Toxin (Protein)
Gene name | yonT | Uniprot ID | - |
Locus tag | D9C14_RS17690 | Protein ID | WP_017696861.1 |
Coordinates | 3443543..3443719 (+) | Length | 59 a.a. |
Antitoxin (RNA)
Gene name | SR6 | ||
Locus tag | - | ||
Coordinates | 3443660..3443760 (-) |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
D9C14_RS17675 | 3439024..3441546 | - | 2523 | WP_121572576.1 | hypothetical protein | - |
D9C14_RS17680 | 3441591..3441770 | - | 180 | WP_064814709.1 | hypothetical protein | - |
D9C14_RS17685 | 3442324..3442644 | + | 321 | WP_162983476.1 | hypothetical protein | - |
- | 3443503..3443602 | - | 100 | NuclAT_0 | - | - |
- | 3443503..3443602 | - | 100 | NuclAT_0 | - | - |
- | 3443503..3443602 | - | 100 | NuclAT_0 | - | - |
- | 3443503..3443602 | - | 100 | NuclAT_0 | - | - |
D9C14_RS17690 | 3443543..3443719 | + | 177 | WP_017696861.1 | hypothetical protein | Toxin |
- | 3443660..3443760 | - | 101 | - | - | Antitoxin |
D9C14_RS17695 | 3443738..3443989 | + | 252 | WP_121572578.1 | hypothetical protein | - |
D9C14_RS17700 | 3444034..3444192 | + | 159 | WP_121572579.1 | hypothetical protein | - |
D9C14_RS17705 | 3444280..3445497 | + | 1218 | WP_121572580.1 | hypothetical protein | - |
D9C14_RS17710 | 3445825..3447693 | + | 1869 | WP_162983477.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Prophage | - | - | 3377178..3547414 | 170236 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 59 a.a. Molecular weight: 6878.45 Da Isoelectric Point: 12.8833
>T112685 WP_017696861.1 NZ_CP032860:3443543-3443719 [Bacillus subtilis subsp. subtilis]
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
VLEKVGIIVAFLISLTVLTINSLTIVEKIRNLKNGTSKKKKRIRKRLRPKRQRQRIRR
Download Length: 177 bp
>T112685 NZ_CP032860:3443543-3443719 [Bacillus subtilis subsp. subtilis]
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCAGATGA
GTGCTTGAGAAAGTGGGTATCATAGTTGCTTTCCTCATATCTTTAACGGTTCTTACAATCAACAGTCTAACAATAGTTGA
GAAGATAAGAAACCTAAAGAATGGGACAAGCAAAAAGAAAAAGCGTATACGCAAGCGGCTCCGACCAAAGAGACAACGCC
AACGTATACGCAGATGA
Antitoxin
Download Length: 101 bp
>AT112685 NZ_CP032860:c3443760-3443660 [Bacillus subtilis subsp. subtilis]
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCTGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
TAGGAACTAAAGGAGAAGTTCATTCCCCTTTAGCTTAGCTCTCATCTGCGTATACGTTGGCGTTGTCTCTTTGGTCGGAG
CCGCTTGCGTATACGCTTTTT
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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