Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mqsRA (relBE)/MqsR-MqsA
Location 1785072..1785775 Replicon chromosome
Accession NZ_CP032616
Organism Pseudomonas sp. DY-1

Toxin (Protein)


Gene name mqsR Uniprot ID -
Locus tag D6Z43_RS08615 Protein ID WP_120651544.1
Coordinates 1785072..1785368 (+) Length 99 a.a.

Antitoxin (Protein)


Gene name mqsA Uniprot ID -
Locus tag D6Z43_RS08620 Protein ID WP_120651545.1
Coordinates 1785371..1785775 (+) Length 135 a.a.

Genomic Context

D6Z43_RS08610D6Z43_RS08615D6Z43_RS08620D6Z43_RS08630D6Z43_RS27850D6Z43_RS08640D6Z43_RS08600D6Z43_RS08605D6Z43_RS08635D6Z43_RS08645
Location: 1783590..1784912 (1323 bp)
Type: Others
Protein ID: WP_162945820.1
Location: 1785072..1785368 (297 bp)
Type: Toxin
Protein ID: WP_120651544.1
Location: 1785371..1785775 (405 bp)
Type: Antitoxin
Protein ID: WP_120651545.1
Location: 1786376..1787065 (690 bp)
Type: Others
Protein ID: WP_120651546.1
Location: 1787107..1787520 (414 bp)
Type: Others
Protein ID: WP_162945821.1
Location: 1788698..1789669 (972 bp)
Type: Others
Protein ID: WP_120651548.1
Location: 1781669..1782715 (1047 bp)
Type: Others
Protein ID: Protein_1655
Location: 1782714..1783367 (654 bp)
Type: Others
Protein ID: Protein_1656
Location: 1787683..1788540 (858 bp)
Type: Others
Protein ID: WP_120651547.1
Location: 1789749..1790468 (720 bp)
Type: Others
Protein ID: WP_120651549.1
ToxinAntitoxinOther genes
Loading, please wait
Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
D6Z43_RS086001781669..1782715-1047Protein_1655DUF1254 domain-containing protein-
D6Z43_RS086051782714..1783367-654Protein_1656phage portal protein-
D6Z43_RS086101783590..1784912+1323WP_162945820.1hypothetical protein-
D6Z43_RS086151785072..1785368+297WP_120651544.1type II toxin-antitoxin system MqsR family toxinToxin
D6Z43_RS086201785371..1785775+405WP_120651545.1type II toxin-antitoxin system MqsA family antitoxinAntitoxin
D6Z43_RS086301786376..1787065+690WP_120651546.1crotonase/enoyl-CoA hydratase family protein-
D6Z43_RS278501787107..1787520+414WP_162945821.1hypothetical protein-
D6Z43_RS086351787683..1788540-858WP_120651547.1alpha/beta fold hydrolase-
D6Z43_RS086401788698..1789669+972WP_120651548.1magnesium and cobalt transport protein CorA-
D6Z43_RS086451789749..1790468-720WP_120651549.1amidotransferase-

Associated MGEs

Loading, please wait
MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase toxin MqsR

(5-97)

Antitoxin

Cro/C1-type helix-turn-helix domain

(72-125)


Sequences

Toxin        


Download         Length: 99 a.a.        Molecular weight: 11285.09 Da        Isoelectric Point: 6.4653

>T111996 WP_120651544.1 NZ_CP032616:1785072-1785368 [Pseudomonas sp. DY-1]
MEKRTPHFKLVLVKQAAAEQRYRFTRVALEGGAELGLDIDGMLAIIQALTARDFYKSMTTYADHTLWQDVYRPTTDVGQL
YLKFTLVEDLLIVSFKEL

Download         Length: 297 bp

>T111996 NZ_CP032616:1785072-1785368 [Pseudomonas sp. DY-1]
ATGGAGAAGCGCACACCACACTTCAAGCTGGTATTGGTCAAGCAAGCCGCTGCGGAGCAGCGATACCGCTTCACACGAGT
GGCCCTGGAAGGTGGCGCGGAACTGGGTCTGGACATCGACGGCATGCTCGCCATCATCCAGGCCCTCACCGCTCGCGACT
TCTACAAGAGCATGACCACCTACGCCGACCACACCCTCTGGCAGGACGTTTACCGCCCCACCACCGACGTCGGCCAGCTT
TACCTCAAGTTCACCCTGGTGGAGGACCTTCTCATCGTGTCCTTCAAGGAGCTCTGA

Antitoxin


Download         Length: 135 a.a.        Molecular weight: 14721.01 Da        Isoelectric Point: 8.4887

>AT111996 WP_120651545.1 NZ_CP032616:1785371-1785775 [Pseudomonas sp. DY-1]
MKCPVCGQAYLVHDVRDIPYIYKGESTLIPNVEADWCNACGESLTGPAESKRVMLAMNLARQQVNARAGHLELIKAVRKQ
LKLTQKQAGELFGGGPNAFSRYEKGDVDAPTALVKLFQLLQKHPELGDEVKRAG

Download         Length: 405 bp

>AT111996 NZ_CP032616:1785371-1785775 [Pseudomonas sp. DY-1]
ATGAAATGCCCGGTATGCGGCCAGGCCTACCTGGTCCACGACGTTCGCGACATTCCGTACATCTACAAGGGCGAAAGCAC
CCTCATCCCCAACGTAGAAGCGGACTGGTGCAACGCCTGCGGAGAGTCCCTCACAGGTCCGGCGGAATCCAAGCGAGTCA
TGCTGGCAATGAACCTTGCCCGGCAGCAGGTCAACGCACGCGCCGGGCACCTAGAGCTGATCAAGGCCGTACGCAAGCAG
CTCAAGCTCACCCAGAAGCAAGCGGGCGAGCTGTTCGGTGGCGGCCCTAATGCATTCAGTCGCTACGAGAAAGGCGACGT
GGATGCGCCCACAGCGCTGGTGAAGCTGTTCCAGCTGCTCCAGAAGCATCCCGAGCTGGGGGATGAGGTAAAGCGCGCTG
GCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
Loading, please wait
Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

Loading, please wait
Source
ID
Structure
No matching records found

Antitoxin

Loading, please wait
Source
ID
Structure
No matching records found

References